Pseudomonas putida HB3267: B479_01865
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Entry
B479_01865 CDS
T02389
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ppuh
Pseudomonas putida HB3267
Pathway
ppuh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B479_01865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppuh03400
]
B479_01865
Enzymes [BR:
ppuh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
B479_01865
DNA repair and recombination proteins [BR:
ppuh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B479_01865
Prokaryotic type
B479_01865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_5
HHH_8
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AGA71289
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All DBs
Position
complement(437800..438867)
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AA seq
355 aa
AA seq
DB search
MSPEQFSSAVLDWYDEHGRHDLPWQQGINPYRVWVSEIMLQQTQVSTVLNYFDRFMQALP
TVQALAEAPEDEVLHLWTGLGYYTRARNLQKAAKIVVAQHGGEFPRSVEQLTELPGIGRS
TAGAIASISMGIRAPILDGNVKRVLARYTAQAGYPGEPKVANQLWATAERFTPQQRANHY
TQAMMDMGATLCTRSKPSCLICPLQRGCEAHLHGEETRYPEPKPRKALPQRRTLMPLLAN
NEGAILLYRRPSSGLWGGLWSLPELDDIAQLDDLAYQHGLRLADSRAMDGLTHTFSHFQL
AIEPWLVRVDPVGQHVAEADWLWYNLATPPRLGLAAPVKKLLKRAADELIAGDAR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgagcagttctccagcgcagtgctggattggtatgacgaacacggccggcac
gacctgccctggcaacagggcatcaacccgtaccgggtatgggtgtcggaaatcatgttg
cagcagacccaggtcagcaccgtgctcaactacttcgaccgcttcatgcaggccctgccg
accgtgcaggccctggccgaggcgccggaggacgaggtactgcacctgtggacgggcctg
ggctactacacccgggcacgcaacctgcaaaaggccgccaagatcgtggtcgcacagcat
ggcggcgaattcccgcgcagtgtcgagcagctcaccgagctgcccggcatcggccgctcc
accgccggcgccatcgccagtatcagcatgggcatccgcgcaccgatcctcgacggcaac
gtcaagcgcgtgctcgcccgctacaccgcccaggccggctaccccggcgagcccaaggtg
gccaaccagctgtgggccacggccgaacgctttaccccacagcagcgcgccaaccactac
acccaggcgatgatggacatgggtgccacgctgtgcacccgcagcaagcccagctgcctg
atctgcccgctgcagcgcggctgcgaagcgcacctgcacggtgaagaaacccgctacccc
gagcccaagccgcgcaaggcactgccgcaacgccgcacgctgatgccgctgctggccaac
aacgaaggcgccatcctgctttaccgtcgcccgtccagcggcctgtggggtggtttgtgg
agcctgccggaactggacgacattgcccagctcgacgacctggcctaccagcacggcctg
cgcctggctgacagccgcgccatggacggcctgacccataccttcagccacttccagctg
gcgatcgaaccctggctggtgcgcgtcgacccggtcggccagcacgtggccgaggccgac
tggctctggtataacctcgccaccccgccgcgcctgggcctcgccgccccggtgaaaaag
ctgctcaaacgcgcggccgacgaactgattgcaggagatgcccgatga
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