Pseudomonas putida HB3267: B479_20395
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Entry
B479_20395 CDS
T02389
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppuh03009
]
B479_20395 (rimO)
Enzymes [BR:
ppuh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
B479_20395 (rimO)
Ribosome biogenesis [BR:
ppuh03009
]
Prokaryotic type
ribosomal protein modification factors
B479_20395 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AGA74971
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Position
4482610..4483941
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AA seq
443 aa
AA seq
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MSTTPATPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAK
AESLEVIGEAIKENGKVIVTGCMGVEEGSIRDVHPSVLSVTGPQQYEQVVNAVHEVVPPR
QDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLSEAE
RLVKAGVKEILVISQDTSAYGVDVKYKTDFWNGRPVKTRMLELCEALSSLGAWVRLHYVY
PYPNVDDVIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDRTLARIKNWREQCPELV
IRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLEEVPDDVKQD
RWDRFMAHQQAISAARLQLRIGKEIDVLIDEVEEQGSVGRSFFDAPEIDGSVFIDGDHGF
KPGDKVRCRVVDADEYDMWAEPI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccacgcccgccacccccaaggtaggtttcgtaagcctgggttgcccaaaagcc
ctggtcgattccgagcgcatcctgacccagctgcgcatggaaggctatgaagtcgtgccc
acctacgaggacgccgacgtagtggtggtcaacacctgcggcttcatcgacagcgccaag
gccgagtcgttggaagtgatcggcgaagcgatcaaggaaaacggcaaggtcatcgtcacc
ggctgcatgggtgtcgaggaaggcagcatccgtgacgtacacccgagcgtgctgtcggtc
accggcccgcagcagtacgagcaggtggtcaacgccgtgcacgaagtggtgccaccacgc
caggaccacaacccgctgatcgacctggtgccaccgcagggcgtcaagctgaccccgcgc
cattatgcgtacctgaagatctccgaagggtgcaaccacagctgcagtttctgcatcatc
ccgtcgatgcgcggcaaactggtcagccgcccggtcggcgaagtgctgagcgaggccgag
cgcctggtcaaggccggggtcaaggagatcctggtgatttcccaggacaccagcgcctac
ggcgtcgacgtcaagtacaagaccgacttctggaacggccgcccggtcaagacccgcatg
ctcgagctgtgcgaagccctgagcagcctgggtgcctgggtacgtctgcactacgtgtac
ccgtacccgaacgtcgacgacgtgatcccgctgatggccgccggcaagatcctgccgtac
ctggatatcccgttccagcacgccagcccgaaagtgctcaaggccatgaagcgcccggcc
tttgaagaccgcaccctggcacgtatcaagaactggcgcgagcagtgcccggagctggtg
attcgctccaccttcatcgtcggcttcccgggcgagaccgaggaagacttccagtacctg
ctggactggctgaccgaagcccagctggaccgcgtgggctgcttccagtactcgccggtg
gaaggcgccccggccaacgacctgggccttgaagaagtgccggacgacgtcaagcaggac
cgctgggaccgcttcatggcccaccagcaggccatcagcgccgcccgcctgcaactgcgt
atcggcaaggaaatcgacgtgttgatcgatgaagtggaagagcaaggttcggttggccgc
agcttcttcgatgccccggaaatcgacggcagcgtgttcatcgatggcgaccacggcttc
aagccgggtgacaaggtacgttgccgcgtggtggatgccgacgaatacgacatgtgggct
gaacccatctaa
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