KEGG   Pseudomonas putida HB3267: B479_21900
Entry
B479_21900        CDS       T02389                                 
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
ppuh  Pseudomonas putida HB3267
Pathway
ppuh00470  D-Amino acid metabolism
ppuh00550  Peptidoglycan biosynthesis
ppuh01100  Metabolic pathways
ppuh01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:ppuh00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    B479_21900 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    B479_21900 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    B479_21900 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppuh01011]
    B479_21900 (ddl)
Enzymes [BR:ppuh01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     B479_21900 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:ppuh01011]
 Precursor biosynthesis
  Amino acid ligase
   B479_21900 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 ATP-grasp ATP-grasp_3 RimK ATPgrasp_YheCD ATP-grasp_5 TTL GARS_A ATPgrasp_Ter
Other DBs
NCBI-ProteinID: AGA75269
LinkDB
Position
complement(4822709..4823665)
AA seq 318 aa
MTSAYDKLHSTLDVKAFGRVAVLYGGKSAEREVSLKSGAAVIDALTTAGVDVVAIDVGDD
LLDRLQSEKIDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWQ
SLGIPTPRHAVLASESDCLQASTELGFPLIVKPAHEGSSIGMAKVNSAQELVAAWQDAAR
YDSQVLVEQWIHGPEFTVAVLRGQVLPPIALGTPHVFYDYDAKYIANDTQYRIPCGLDSV
KEQELIDLTARACDAIGIEGWGRLDVMQDEQGRFWLLEVNTAPGMTDHSLVPMAARAAGL
DFQQLVLAILAESVATRG
NT seq 957 nt   +upstreamnt  +downstreamnt
atgaccagcgcctacgacaagctgcactcgaccctggacgtcaaggcgttcggccgcgtc
gcggtgctgtacggcggcaagagcgccgagcgcgaagtgtcgctcaagtccggtgccgca
gtgatcgacgcgctgaccaccgccggtgtcgacgtggtcgccatcgacgtgggtgacgac
ctgctcgaccgcctgcaaagcgagaagatcgaccgcgccttcatcatcctccacggccgt
ggcggtgaagacggcagcatgcaaggcctgctcgagtgcctgggcatcccctacaccggc
agtggcatccttgcctcggcactggccatggacaagctacgcaccaagcaagtgtggcag
agcctgggcattccgaccccgcgccacgcggtgctggcgagcgaaagcgattgtttgcag
gccagtacggaactgggcttcccgcttatcgtcaaacccgcccatgaaggttccagcatc
ggcatggccaaggtgaacagcgcccaggaactggtcgccgcctggcaggatgccgcccga
tacgattcccaggtactggtggagcagtggatccacgggccggagttcaccgtcgcggta
ttgcgcggccaggtgctgccgccgatcgccctgggtacgccgcacgtgttctacgactac
gacgccaagtacatcgccaacgatacccagtaccgcattccctgcggcctggacagcgtc
aaggaacaggaactgatcgacctgaccgcgcgtgcctgcgatgccatcggcatcgaaggc
tgggggcggctggacgtgatgcaggacgagcagggccggttctggctgctcgaagtcaac
accgcacccggcatgaccgaccatagtctggtgcccatggcggcccgcgcggccggcctg
gacttccagcaactggtgctggcgatcctggccgagagcgtggcgacgcgaggttaa

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