Pectobacterium punjabense: E2566_05225
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Entry
E2566_05225 CDS
T06530
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E2566_05225 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppuj03400
]
E2566_05225 (recC)
Enzymes [BR:
ppuj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E2566_05225 (recC)
DNA repair and recombination proteins [BR:
ppuj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E2566_05225 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QJA19364
LinkDB
All DBs
Position
1133367..1136765
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AA seq
1132 aa
AA seq
DB search
MFRIYHSNQLDILKELMVELIKRQPLADPFQQEVILVQSPGMAQWLQIELAGDFGIAANI
QFPLPGVFLWNMCRHVLSDIPKESAFSKDAMTWKLMHLLPDLLAQPDFAALNHYLQDDDN
QRKLHQLAGRVADLFDQYLIYRPEWIKAWQEGKQVDDLGGNQLWQSALWRALVDYTRDLA
QPEWHHAILYQRFINALDRAKVCPKGLPPRVFICGISALPPIYLQALNALARHIDVHLLF
TNPCRHYWSDIQDYKFLAKLKARNRRLHRFDGEQTDETRPLFRDLSQAETLFNDDGKQSI
NNPLLASWGKLGRDNLYLLAELDNVQEIDAFVESDGKNLLQTLQRDILELEDHAVVAVSH
ETQNSSTKKRRLALDDRSVDFHTCHSPQREVEVLHDRLLAMMADDPELMPRDVIVMMADI
DGYTPFIQAVFGNAPDNRYLPFAISDQRARHAHPALQAVISLLDLPTSRFTAEQVLALLE
VPALAARFGIQEEGLRRLRLWVVESGVRWGLDDDNVRDLMLPPTGQHTWRFGLTRMLLGY
AMDSQVGDWQGVLPYDESSGLIAELAGQLAELLMQIHQWRQRLSQSRVLVDWLPLCRELI
ETFFDADSETEAALALVEKQWQYVISMGTMAHYPQQVSISRLRDELSRRLDQERLSQRFL
AGSINFCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMGRKIKRGDRSRRDDDRYL
FLEALLSAQNKLYISYIGRSIQDNTRRYPSVLVSELTEYIAQSYVLPGDEALDIDSSAER
VVKHLCREHTRMPFDANNFLSAPQPLSFAAEWLAAANRKGEAQPDFDREALSERAGDNHV
SLDDLKRFYRHPVRAFFQLRLGVSFMLHSDELLDEEPFVVDSLNRYQLNSELLNTLINEG
DTEKLYRRARAAGELPYGAFGEIYWQEQQQDMAQLAARVRDELTPMLSGSREVDIILDGV
RISGWLNQVQPDGLLRWRPGTLSMKDGITLWLEHLAYCAAGGQGESRLYGREDTAWRFAA
LSEAQAREQLAVMLDGYRQGMSKPLLLLNKAGSAWLAECYDRESDSLRSDEEVQNKARAR
LLQAWQGNMGMRGEGEDYYLQRIVRELDEKRMNEVVEAAQIWLLPPFRSNLA
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaatctatcactccaaccagttggatatcttgaaagaactgatggttgagctg
ataaaacgtcagccgcttgcggaccctttccaacaggaagtgattttggtgcaaagccca
gggatggcgcagtggctgcaaattgaactggctggggattttggtattgctgccaatatc
caattcccattgcccggcgttttcttgtggaatatgtgtcgccatgtgctgtcagatatt
ccaaaagaaagtgccttcagcaaggatgcgatgacgtggaagctcatgcatttgctgcct
gatttactggcacagcctgattttgcggcgcttaatcactatttgcaggatgatgataac
cagcgcaagctgcatcaactggccgggcgcgtggcggaccttttcgatcaatacctgatt
tatcgccctgagtggatcaaagcatggcaagaggggaaacaggttgacgatctcggtggt
aaccaactttggcagtcggcgctgtggcgtgcgctggtggactacacacgtgatctagct
cagcctgaatggcaccatgcgattctgtaccaacgctttatcaacgcgttagatcgggca
aaagtgtgtccgaagggtctgccgccacgcgtttttatctgcggtatttcagcgctcccc
cctatctatctacaggcgttgaacgctctggcacgacacattgatgtgcacctattgttt
accaatccctgccgccattattggagtgacattcaggattataaatttctggcgaagcta
aaagcccgcaaccggcgcttacatcgctttgacggcgagcagacggatgaaactcgtcca
ctatttcgcgatctctcacaggcagaaacattgttcaatgacgacggtaaacagtcgatt
aataacccgttgctggcatcgtggggcaaactggggcgcgataacctttatctgctggct
gagctggataacgtgcaggagatcgatgcttttgttgagtcggatggcaaaaatctgctg
caaacgttgcagcgcgatattcttgaactggaagaccacgcggtcgtagccgttagtcac
gaaacacaaaacagcagcacgaaaaagcgtcggttggcgcttgacgatcgttcggttgat
tttcacacctgccatagtccgcagcgtgaggttgaagtgctgcacgatcggctgttggct
atgatggcggacgatcctgagctgatgccgcgtgatgtcattgtgatgatggcggacatt
gatggctatacgccgttcattcaggcggtgtttggcaacgcgccggataatcgctacctg
ccttttgccatctctgatcagcgcgcgcgacatgcgcatcccgcattgcaagcggtgatc
agcttgctggatttacccacaagccgttttacggcagagcaggttctggcattgcttgaa
gtgcccgcactggccgctcgtttcggtattcaggaagaagggttgcggcgcttgcgcctg
tgggtggtggagtcgggcgtccgttgggggttggatgacgacaacgtgcgcgatctgatg
ctgccaccaacgggtcagcatacgtggcgttttggcctgacgagaatgctgttgggctat
gcgatggacagtcaggtcggtgattggcagggggtactgccttacgatgagtctagcggt
ctgattgcggagctggccggccaactggctgaactgctgatgcagatccatcaatggcgc
cagcgtctgtctcaatcgcgcgtacttgtcgattggttaccgctttgtcgagagctgatc
gaaaccttctttgatgctgacagcgagaccgaagcggcgctggcattggttgaaaagcag
tggcaatacgtcattagcatgggcacgatggcgcattatccgcagcaagtgtcgatttcc
cgattgcgtgatgaactgtcacggcgtctcgatcaggagcgacttagccagcgctttttg
gccggatctatcaatttctgtacgctgatgccgatgcgttccatcccgtttaaggtcgtg
tgtttattgggcatgaacgatggtgtttacccacgaacgctcccgccgcttgggttcgat
ctgatggggcgaaaaatcaaacgtggtgatcgtagccgacgtgacgacgatcgctatctg
tttcttgaggcgctcttgtcggcgcagaacaagctttatatcagctatatcgggcgatcg
attcaggataatacgcgccgctatccttcagtattggtcagtgaactgacggaatatatt
gcacagagttatgtcctgccgggtgatgaagcattggatatcgatagcagtgcagaacgt
gtcgtgaagcacctctgccgtgaacatacccgtatgccttttgatgcgaataatttcctg
tcggcaccgcagccgttgagctttgcggcagaatggttggcggcggcgaaccgaaaagga
gaagctcagcctgattttgatcgcgaagcgctctctgaaagagcgggcgataaccatgtc
agtttggacgatctgaaacgtttctatcgtcaccctgttcgagccttctttcaactgcga
cttggtgtgagttttatgctgcacagtgacgaactgttggatgaagagccctttgtggtt
gatagccttaaccgctaccaattgaatagcgagctgcttaataccttgattaatgaaggt
gatacggaaaaactgtatcgtcgtgccagagccgcgggtgaactaccctatggcgcattc
ggtgaaatatactggcaggaacaacagcaggatatggcacaactggctgcgcgcgtgcgt
gatgagttaacgccaatgctgtcggggagccgggaagtcgacattatccttgacggtgta
cgcatcagcggctggctgaatcaggtgcagccggatggtttgttgcgctggcgtccaggt
acgctttccatgaaagatggtattacgctgtggctggaacatctggcttactgtgcggcg
ggcgggcagggagaaagtcgactgtatgggcgtgaagacactgcgtggcgctttgctgcc
ttatcggaagcgcaagccagagaacagctggccgtcatgttggatggctatcgtcaggga
atgagtaagccgctattactgctcaataaagcagggagtgcgtggttagctgaatgctat
gatcgtgaaagtgatagcctacggtcggatgaagaggtgcagaacaaagcacgtgcccgt
ttgctgcaagcctggcagggcaatatgggaatgcggggagaaggcgaagattattaccta
caacgcattgttcgtgaattggatgaaaaacgaatgaatgaagtggttgaagcggcacaa
atctggctactgccaccgttccgctctaatctggcttga
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