Pectobacterium punjabense: E2566_05785
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Entry
E2566_05785 CDS
T06530
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj03060
Protein export
ppuj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
E2566_05785 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
E2566_05785 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppuj02044
]
E2566_05785 (secD)
Secretion system [BR:
ppuj02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
E2566_05785 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD-TM1
SecD_1st
SecD_SecF
MMPL
Sec_GG
Motif
Other DBs
NCBI-ProteinID:
QJA19464
LinkDB
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Position
1283466..1285313
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AA seq
615 aa
AA seq
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MLNRYPLWKYLMLVVVLFVGLLYALPNLYGEDPAVQVTGARGTAASETTLIQVQNVLKEQ
NITSKSIALENGAILARFSNPDVQLRAREALVNELGEKFVVALNLAPATPTWLRLLGAEP
MKLGLDLRGGVHFLMEVDMDTALGKLQEQTMDSLRSDLREKNIPYAAVRKIDNYGVEIRF
RDAQTRDEGINYLTTRHRNLVLSSSGSNLLRAVMSDERLREAREYAVQQNINILRNRVNQ
LGVAEPLVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNSNADATAAANGRVPG
DSEVKNMRDGSPVVLFKRVILTGDHITDSTSSNDEYNRPQVNISLDSAGGNTMSNFTKDS
IGKLMATLFVEYKDSGKKDATGRSILEKHEEVINVATIQSRLGNSFRITGIDNPNEARQL
SLLLRAGALIAPIQIVEERTIGPTLGMQNITQGLEACLWGLIASILFMVFFYKKFGVIAT
SALVANLVLIVGVMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRSIQQ
AIHEGYKGAFSSIVDANVTTLIKVIILYAVGTGSIKGFAITTAIGIATSMFTAIVGTRAI
VNLLYGGKRINKLSI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaatcgttatcctttgtggaagtacctgatgctggtcgtggtgttgttcgtcggc
ctgctctacgcacttcctaacctatatggtgaggatccggcggtacaagttactggcgcg
cggggaaccgccgccagcgaaacgacgctgatccaagtccagaatgtcttaaaagaacaa
aacattaccagtaagtcgattgcattggaaaatggtgcaatcctggctcgcttctctaac
cctgatgttcaactccgcgcgcgcgaagcgctcgttaatgagctgggcgaaaaattcgtc
gtcgcacttaaccttgctcccgccacgccaacgtggctgcggttgttaggcgctgaaccg
atgaaattggggctcgatctgcgcggcggcgttcacttcctgatggaagtggatatggat
acggcgctgggtaaactgcaagaacaaaccatggactctttgcgcagcgatctgcgtgag
aagaacatcccttatgccgcagtgcgtaaaattgataattacggcgtcgaaattcgtttc
cgtgatgctcaaacgcgtgatgagggcatcaactatctgacgactcgtcaccgtaatctg
gttctcagcagcagcggtagcaacctgctacgtgcagtgatgtctgatgaacgtctgcgt
gaagcacgtgaatacgccgtacagcagaacatcaatatcctgcgtaaccgtgtgaaccaa
ctgggtgtcgccgaaccgctagtacagcgtcagggcgccgatcgtatcgttgttgagtta
ccgggtatccaggacacggcgcgcgcgaaagaaattcttggtgccaccgctacgctggaa
ttccgtctggtcaacagtaatgctgatgcgaccgcagcggcgaacggccgcgtgccgggc
gattccgaagtgaagaatatgcgtgacggttcacccgttgtgctgttcaaacgcgtcatt
ctgacgggtgatcacatcactgactcaacatcaagcaatgacgaatacaaccgtcctcag
gtgaatatttctctggacagcgcgggtggcaacaccatgtccaacttcaccaaagacagt
atcggcaagctgatggcgacgctgttcgtggaatataaagacagcggtaagaaagatgcg
acgggccgttcgatactggaaaaacacgaagaagtcatcaacgtagcgacgattcagtcg
cgactgggtaacagcttccgtattaccggcattgataacccgaatgaggcgcgtcagctt
tctctgctgctgcgtgcgggtgcgctgattgcaccgatccagattgtggaagaacgtact
attgggccaacgttggggatgcaaaacatcactcagggtctggaagcctgtttgtggggc
ttgatcgcgtcgatcctcttcatggtcttcttctacaagaagtttggtgtcatcgcgacc
agtgcattggttgctaacctggtgttgattgtcggcgtgatgtctctgctaccaggcgcg
acgctaactatgccgggtatcgcgggtatcgtgcttacactggcggttgcagtcgatgct
aacgtactcattaacgaacgtatcaaagaagaactcagcaatggtcgctctatacagcag
gctattcatgagggctacaaaggtgcattcagttcgattgttgatgcgaacgtcacgacg
ttgattaaagtcatcatcctgtatgcggttggtaccggttctatcaaagggtttgctatc
acgactgcgattgggattgcgacctcaatgtttacggcgatcgtcggtactcgtgccatc
gttaacctgctttacggcggtaaacgtatcaacaagctgtctatctag
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