Pandoraea pulmonicola: RO07_05595
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Entry
RO07_05595 CDS
T03553
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul00470
D-Amino acid metabolism
ppul00550
Peptidoglycan biosynthesis
ppul01100
Metabolic pathways
ppul01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RO07_05595
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RO07_05595
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RO07_05595
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppul01011
]
RO07_05595
Enzymes [BR:
ppul01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RO07_05595
Peptidoglycan biosynthesis and degradation proteins [BR:
ppul01011
]
Precursor biosynthesis
Amino acid ligase
RO07_05595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp
ATPgrasp_ST
ATP-grasp_4
CPSase_L_D2
TTL
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AJC20082
LinkDB
All DBs
Position
complement(5215940..5216878)
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AA seq
312 aa
AA seq
DB search
MGGRSAERQVSLISGNGVLEALRSRGVDAHAFDTGTQDLAALAAQKFDRVFIALHGRYGE
DGTLQGALEHLGIPYTGSGVLASALAMDKEMTKRVWINEGLPTPRFTMLSADSDFDTVAR
DLGLPLIVKPAREGSTIGLTKVTDASQLKAAYEKAAALDPDVLAEEFIDGDELTVPVLGV
GTKGAAAARSLPVIRIVAPDANYDYQNKYFKDDTRYECPPPLSVSLQEEVQRLVLRAYLV
LGCRGWGRVDVMLRKRDSKPFLLEINTSPGMTGHSLVPISARAAGLSYEDLVLEILATAT
LDLHPNAQWKPE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggcgctcggccgagcgtcaggtctcgctgatttcgggcaacggtgtgctcgaa
gcgctgcgctcgcgcggcgtggacgcccacgcgttcgataccggcacgcaggacctggcg
gcactcgccgcacagaagttcgaccgagtgttcatcgcgctgcacggccgttacggtgaa
gacggcacgctgcagggcgcgctcgagcatctgggcattccgtacaccggcagcggcgtg
ctggcttccgcgctggcgatggacaaggaaatgaccaagcgcgtctggatcaacgaaggg
ctgccgacgccgcgcttcacgatgctttcggctgacagcgatttcgatacggtcgcgcgc
gacctcggcctgccgctgatcgtcaagccggcgcgcgagggctcgaccatcggactgacg
aaggtcaccgatgcgtcgcaactgaaagccgcctacgagaaggccgccgcgctcgatccg
gacgtgctcgccgaggaattcatcgacggcgacgaactcaccgtgcccgtgctcggcgtg
ggcacgaagggggcggccgcggcgcgctcgctgccggtgatccgcatcgtggcgcctgac
gcgaactacgactaccagaacaagtatttcaaggacgacacccgctacgagtgcccgccg
ccgctatcggtgtcgttgcaggaagaagtgcagcgtctcgtgttgcgcgcgtatctcgtg
ctgggttgccggggctggggacgcgtcgacgtgatgctgcgcaagcgcgacagcaagccg
ttcctgctggagatcaatacgtcgccgggcatgaccggtcactcgctggtgccgatttcg
gcgcgcgcggcgggcctgtcgtacgaagacctggtgttggaaattctggccaccgcgacg
ctcgatctgcatccgaacgcgcagtggaagcccgagtaa
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