Pandoraea pulmonicola: RO07_09685
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Entry
RO07_09685 CDS
T03553
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RO07_09685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppul03400
]
RO07_09685
Enzymes [BR:
ppul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RO07_09685
DNA repair and recombination proteins [BR:
ppul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RO07_09685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AJC23206
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All DBs
Position
complement(288069..288842)
Genome browser
AA seq
257 aa
AA seq
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MRIITANLNGVRSAAKKGFFEWFGNQEADILCVQEIKAQLPDMTPDFLKPHDYQGYFHYA
QKKGYSGAGVYVRREPDDILIGWGNEEFDAEGRYVEVRYGNLSVISVYIPSGSSGEERQA
AKFRFMADFMPHLLSLKAAGREVVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEERAWLTQ
LFDDHGYVDVFRTLDARPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAGKAKATSVFRD
IKFSDHAPLTVDYDHAL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcattaccgcgaatctgaacggcgtgcgatcggccgccaagaagggctttttc
gagtggttcggcaatcaggaagccgacatcctgtgcgtgcaggagatcaaggcgcagttg
ccggacatgacaccggacttcctcaagccgcacgactaccagggctatttccactacgcg
cagaaaaaaggctacagcggcgccggcgtgtacgtgcgacgcgagcccgacgacatcctc
atcggctggggcaacgaagaattcgatgcggaaggtcgctacgtcgaagtgcgctacggc
aacctgtcggtgatctccgtctacatcccgtcgggctcgagcggcgaagagcgccaggcg
gcgaagttccgcttcatggcagacttcatgccgcacctgctctcgctcaaggcagccggt
cgcgaggtcgtgctgtgcggcgacgtcaacatcgcgcacaaggaaatcgacatcaagaac
tggaagggcaatctgaagaactccggctttctgccggaggagcgcgcgtggctcacccag
ttgttcgacgatcatggctacgtcgatgtctttcgcacgctcgatgcgcgccccgaacag
tacacgtggtggagcaatcgcgggcaggcctatgcgaagaacgtcggttggcgcatcgac
taccagatcgccacgccgggcatcgcgggcaaggccaaggccacgtcggtgtttcgcgac
atcaagttcagcgaccacgcgcccctaaccgtggattacgatcacgcgctgtaa
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