KEGG   Pandoraea pulmonicola: RO07_09685
Entry
RO07_09685        CDS       T03553                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
ppul  Pandoraea pulmonicola
Pathway
ppul03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ppul00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RO07_09685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppul03400]
    RO07_09685
Enzymes [BR:ppul01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     RO07_09685
DNA repair and recombination proteins [BR:ppul03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     RO07_09685
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: AJC23206
LinkDB
Position
complement(288069..288842)
AA seq 257 aa
MRIITANLNGVRSAAKKGFFEWFGNQEADILCVQEIKAQLPDMTPDFLKPHDYQGYFHYA
QKKGYSGAGVYVRREPDDILIGWGNEEFDAEGRYVEVRYGNLSVISVYIPSGSSGEERQA
AKFRFMADFMPHLLSLKAAGREVVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEERAWLTQ
LFDDHGYVDVFRTLDARPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAGKAKATSVFRD
IKFSDHAPLTVDYDHAL
NT seq 774 nt   +upstreamnt  +downstreamnt
atgcgcatcattaccgcgaatctgaacggcgtgcgatcggccgccaagaagggctttttc
gagtggttcggcaatcaggaagccgacatcctgtgcgtgcaggagatcaaggcgcagttg
ccggacatgacaccggacttcctcaagccgcacgactaccagggctatttccactacgcg
cagaaaaaaggctacagcggcgccggcgtgtacgtgcgacgcgagcccgacgacatcctc
atcggctggggcaacgaagaattcgatgcggaaggtcgctacgtcgaagtgcgctacggc
aacctgtcggtgatctccgtctacatcccgtcgggctcgagcggcgaagagcgccaggcg
gcgaagttccgcttcatggcagacttcatgccgcacctgctctcgctcaaggcagccggt
cgcgaggtcgtgctgtgcggcgacgtcaacatcgcgcacaaggaaatcgacatcaagaac
tggaagggcaatctgaagaactccggctttctgccggaggagcgcgcgtggctcacccag
ttgttcgacgatcatggctacgtcgatgtctttcgcacgctcgatgcgcgccccgaacag
tacacgtggtggagcaatcgcgggcaggcctatgcgaagaacgtcggttggcgcatcgac
taccagatcgccacgccgggcatcgcgggcaaggccaaggccacgtcggtgtttcgcgac
atcaagttcagcgaccacgcgcccctaaccgtggattacgatcacgcgctgtaa

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