Pandoraea pulmonicola: RO07_11625 Help Entry RO07_11625        CDS       T03553                                  Name (GenBank) hypothetical protein   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism ppul  Pandoraea pulmonicola Brite KEGG Orthology (KO) [BR:ppul00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     RO07_11625  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ppul03400]     RO07_11625 Enzymes [BR:ppul01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      RO07_11625 DNA repair and recombination proteins [BR:ppul03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      RO07_11625 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_primase_S TPP_enzyme_N Motif Other DBs NCBI-ProteinID:  APD13314 UniProt:  A0A378Z4C8 LinkDB All DBs Position complement(702574..703491) Genome browser AA seq 305 aa AA seqDB search MARAASPKHNSSALPMKITHGDRVMDTQSGVTKAELAAYYNAVSQWMLPQLDERPFAVLR APEGIGGEMFFQKHAAKTMRGVRELDPSLDPDHQPLMQIDDVRGLVGAVQMGTVEFHTWN ARSDLIERPDRVIFDLDPGKGVEFAQIRDGAELIRSLMEELGLEVFVKTSGGKGLHVVAP LARRHDWELAKGFAERVARHMARVFPDRFTATMGPKHRVGKCFIDYLRNYRGATTVCAYS ARAREGMAVSMPIAWEELPDLRSADQWNVRNALDRLSALKRDPWADYEKAARQRVTKEIL ERLED NT seq 918 nt NT seq  +upstreamnt  +downstreamnt atggctcgtgcagcgtcaccgaagcacaacagctcggccctgccgatgaagatcacgcac ggcgaccgggtgatggacacgcagtcgggcgtcacgaaggcggagctggcggcgtactac aacgccgtcagtcagtggatgctgccgcagctcgacgagcgcccgtttgcagtactgcgt gcgcccgagggcatcggcggcgagatgttctttcagaagcacgcggcgaaaacgatgcga ggcgtgcgtgagctcgatccgtcgctcgatcctgatcatcagccgttgatgcaaatcgac gacgtgcgagggctcgtcggcgccgtgcagatgggcacggtcgaattccacacatggaat gcgcgcagcgatctgatcgagcgtcccgaccgggtgatcttcgatctggatccgggcaag ggcgtggagttcgcccagatccgtgacggtgcggaactgattcgcagtctgatggaggaa ctggggctcgaggtgttcgtgaagacgagcggcggcaagggcctgcacgtggtggcgccg ctggcacgacgtcacgactgggaactcgcgaagggctttgccgagcgcgtggcgagacat atggcgcgcgtctttccggatcgcttcacggcgacgatgggaccgaaacatcgcgtcggc aagtgcttcatcgattacttgcgcaactaccgcggggcaaccaccgtctgcgcgtactcg gctcgcgcccgcgaaggcatggccgtgtcgatgccgatcgcctgggaggagttgcctgac ttgcgaagtgcggaccagtggaacgtgcgcaatgcactcgaccgcctctccgcgctcaag cgcgatccttgggcggattacgaaaaagccgcccggcagcgcgtgacgaaagagattctg gaacggttggaggattga

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