Pandoraea pulmonicola: RO07_15140
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Entry
RO07_15140 CDS
T03553
Name
(GenBank) lytic murein transglycosylase B
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
ppul
Pandoraea pulmonicola
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppul01011
]
RO07_15140
Enzymes [BR:
ppul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RO07_15140
Peptidoglycan biosynthesis and degradation proteins [BR:
ppul01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RO07_15140
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Gene cluster
GFIT
Motif
Pfam:
SLT_2
SLT
Motif
Other DBs
NCBI-ProteinID:
AJC21489
UniProt:
A0A378Z2C1
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All DBs
Position
complement(1488407..1489639)
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AA seq
410 aa
AA seq
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MYDILSPAPSRLTHRPDTGRLHRPHRLRAAATLGNASDRSLLQRLSRPARVLGAALCIGT
FALSTTAGHAQARPKQVAQTEFEEEVVPQRYAANPEVDAFINDIVARDGFDRAELQRIFS
RVVFSQTAARLAAPPAVPGKKNWTNYEKRFLDTTRINGGVRFWNQNAAALSRAARQYGVP
EEIIVAIIGVETIYGRNMGNFRTIDALTTLAFDYPPARNRSERMALFRNELENLLLYARE
RGVDPFGIYGSYAGAIGIPQFMPSSIRNYAVDFSGDSKIDLSNDVADAIGSVANFLKQHG
WQTGQPIVWNIAADRGSQGLAEAGADGQPEPHWKLGDFIKAGMLMNEPRLDVGASLDTPV
LIVDLPTPGQATQYRMGLNNFYVLTRYNRSFFYAMSVYDLADAIKAARAP
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacatactctcgccggcgccctcgcgcctcactcatcgaccggacactggccgc
ctgcatcgtcctcatcgccttcgtgcggctgccaccctcggcaacgcttccgatcgttcc
ctcctgcagcgcctgtcgcgccccgcacgtgtgctcggcgccgcgctttgcatcggcacc
ttcgcactgagtacgaccgccgggcacgcgcaggcgcggcccaagcaggtcgcgcaaacg
gagttcgaggaagaagtcgtgccgcaacgctacgccgccaatcccgaggtcgatgcgttc
atcaacgacatcgtggcgcgcgatggcttcgatcgcgccgagttgcagaggatattctcg
cgtgtggtgttctcgcagacggcggcgcgtctagccgcgccgccggccgtgcctggaaag
aagaactggaccaactacgagaagcgttttctcgataccacccgcatcaatggcggcgtg
cggttctggaatcagaacgccgcggccctgtcccgcgctgccaggcaatacggggtgccc
gaggaaatcatcgtcgccatcatcggcgtggagacaatctacgggcgcaacatgggcaac
ttccgcaccatcgacgcgctcaccaccctcgcgttcgactacccgccggcacgcaaccgc
tccgagcgcatggcgctgtttcgcaacgagctggaaaacctgctgctctatgcgcgcgag
cgcggtgtcgatccgttcggcatctacggctcgtacgcgggcgccattggcattccgcag
ttcatgccatcgtcgatccgcaactacgccgtcgatttcagcggcgacagcaagatcgat
ctgagcaacgacgtggccgatgccatcggcagcgtcgccaacttcctcaagcagcacggc
tggcagacgggacagccgatcgtgtggaacattgccgccgatcgcggcagccagggtctc
gccgaagcgggcgccgacgggcagccggagccgcactggaagcttggcgacttcatcaag
gcgggcatgctgatgaacgagccgcggctcgacgttggcgcatcgctcgacacgccggtg
ctcatcgtcgacctgccgacgccgggtcaggcgacgcagtaccgcatgggcctgaacaac
ttctacgtgctcacgcgctacaaccgcagcttcttctacgcgatgtcggtgtacgacctc
gcggacgcgatcaaggccgcgcgcgcgccgtga
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