Pseudomonas putida NBRC 14164: PP4_49690
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Entry
PP4_49690 CDS
T02707
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ppun
Pseudomonas putida NBRC 14164
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppun03019
]
PP4_49690 (orn)
03009 Ribosome biogenesis [BR:
ppun03009
]
PP4_49690 (orn)
Messenger RNA biogenesis [BR:
ppun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PP4_49690 (orn)
Ribosome biogenesis [BR:
ppun03009
]
Eukaryotic type
Pre-60S particles
RNases
PP4_49690 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BAN56822
LinkDB
All DBs
Position
complement(5618413..5618955)
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLDPDSDVIIEMATIVTDSQLNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGASGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMR
NLENYFHYRNLDVSTLKELAARWAPDVRDSFKKGNTHLALDDIRESIAELRHYREHFIKV
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccacagaacctgatctggatcgacctggaaatgaccggcctggatccggac
agcgatgtcatcatcgagatggccaccatcgtcaccgacagccagctgaacaccctggcg
gaagggccggtgatcgccatccaccacagtgacgaagtgctggcgcgcatggacgaatgg
aacacccgcacccacggtgcttcgggcctgacccagcgcgtgcgcgagagcaaggtcagc
atggctgaagccgaggcgcagaccatcgccttcctcgagcagtgggtgccgaaaggcaag
tcgccaatctgcggcaacagcatctgccaggaccgccgcttcctctatcgccacatgcgc
aacctggaaaactacttccactaccgcaacctggatgtttccaccctgaaagaactggcc
gcgcgctgggcgccggacgtgcgtgacagcttcaagaagggcaacacccacctggcgctg
gacgatatccgcgaatcgatcgccgaactgcgccactatcgcgagcatttcatcaaggtg
tga
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