KEGG   Pseudomonas putida NBRC 14164: PP4_49690
Entry
PP4_49690         CDS       T02707                                 
Symbol
orn
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
ppun  Pseudomonas putida NBRC 14164
Brite
KEGG Orthology (KO) [BR:ppun00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppun03019]
    PP4_49690 (orn)
   03009 Ribosome biogenesis [BR:ppun03009]
    PP4_49690 (orn)
Messenger RNA biogenesis [BR:ppun03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PP4_49690 (orn)
Ribosome biogenesis [BR:ppun03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    PP4_49690 (orn)
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: BAN56822
LinkDB
Position
complement(5618413..5618955)
AA seq 180 aa
MQNPQNLIWIDLEMTGLDPDSDVIIEMATIVTDSQLNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGASGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMR
NLENYFHYRNLDVSTLKELAARWAPDVRDSFKKGNTHLALDDIRESIAELRHYREHFIKV
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcaaaacccacagaacctgatctggatcgacctggaaatgaccggcctggatccggac
agcgatgtcatcatcgagatggccaccatcgtcaccgacagccagctgaacaccctggcg
gaagggccggtgatcgccatccaccacagtgacgaagtgctggcgcgcatggacgaatgg
aacacccgcacccacggtgcttcgggcctgacccagcgcgtgcgcgagagcaaggtcagc
atggctgaagccgaggcgcagaccatcgccttcctcgagcagtgggtgccgaaaggcaag
tcgccaatctgcggcaacagcatctgccaggaccgccgcttcctctatcgccacatgcgc
aacctggaaaactacttccactaccgcaacctggatgtttccaccctgaaagaactggcc
gcgcgctgggcgccggacgtgcgtgacagcttcaagaagggcaacacccacctggcgctg
gacgatatccgcgaatcgatcgccgaactgcgccactatcgcgagcatttcatcaaggtg
tga

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