Pseudomonas putida H8234: L483_05265
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Entry
L483_05265 CDS
T02706
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pput
Pseudomonas putida H8234
Pathway
pput03410
Base excision repair
pput03430
Mismatch repair
pput03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L483_05265
03430 Mismatch repair
L483_05265
03440 Homologous recombination
L483_05265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pput03400
]
L483_05265
DNA repair and recombination proteins [BR:
pput03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
L483_05265
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
L483_05265
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
L483_05265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AGN81417
LinkDB
All DBs
Position
1142727..1144436
Genome browser
AA seq
569 aa
AA seq
DB search
MRIEPRPLPPTLPFLGNLPPLLTRLYAARGVQCEAELDKSLARLLPYQQLKGIEAGVDLL
VEALDQRQRILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
ALQRQPQLLITVDNGISSVEGVAAAKAAGLKVLVTDHHLPGQQLPDADAIINPNQPGCTF
PSKALAGVGVIFYVLMALRARLRSLGRYETQAQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGLKAILEVARRDHRRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLCEDAALAQDMAQQLDELNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDADWHQG
VIGILASRLKERYHRPTIAFADAGEGMLKGSARSVPGFHIRDALDAVAARHPQLISKFGG
HAMAAGLSLPEGNFPAFAEAFDEEVRRQLREEDLTGRLLSDGSLAVEEFHLDLAKALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVRLDGIAFGVDREVWPNPTVR
WVELAYKLDVNEFRGNESVQLMIAHMEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaacctcgccccctgccgccgacactgccatttctgggtaacttgccaccc
ttgctgacccgtctgtacgccgcgcgcggcgtacagtgcgaggccgagctggacaaaagc
ctggcccgcctgctgccgtaccagcaactcaagggcatcgaggccggtgtcgacctgctg
gtcgaggcgctggaccagcgccagcgcattcttatcgttggcgatttcgatgccgatggc
gccacggccagcaccgtcggggtgctgggcctgcggctgctgggtgcggcccacgtcgat
tacctggtgcccaaccgcttcgaatacggctatggcctgaccccggaaatcgtcgaggtg
gcgctgcagcgtcagccgcaactgctgatcaccgtggacaatggtatttccagcgtcgag
ggtgtggcggcagccaaggccgccgggctcaaggtgctggtcactgaccaccacctgcca
ggccagcaactgcccgatgccgacgctatcatcaaccccaaccagcctggctgtacgttc
ccgagcaaggcgctggccggggtaggggtgatcttctatgtgctgatggccctgcgcgcg
cgcctgcgcagcctggggcgctatgagacgcaagcacagccgaacatcggcgagctgctc
gacctggtcgcgttgggcagcgttgccgacgtggtgccgctggatgccaacaaccgcatc
ctggtgcatcagggccttgagcgcatccgcgccggtcgcgcccgcccagggcttaaagca
attctcgaagtggcccgccgcgatcaccggcgtatcacctcgactgaccttggcttcatc
ctcggcccgcggctgaacgccgccggtcgcctggacgacatgagcctgggcatcgagtgc
ctgctgtgcgaagacgcggcgctggcccaggacatggcccagcagcttgacgagttgaac
caggaccgcaagtccatcgagcagggcatgcaacgcgaggccctggcccagctcaaggac
ctgccggtggagtccatgccgtatgggttgtgcctgttcgatgccgactggcaccagggc
gtgatcggtattctggcttcgcggctgaaagagcgttaccaccggcctaccatcgccttc
gccgatgccggtgaaggcatgctcaaagggtcggcgcggtcggtaccaggcttccacatc
cgcgatgcactggatgccgtggcggcgcgccacccacaactgatcagcaagttcggcggc
cacgccatggctgcgggcttatcgttgcctgagggtaatttcccggcctttgccgaggcg
tttgacgaagaagtgcgtcgtcagctgcgtgaggaagacctgacaggccggctgttgtca
gatggcagcctggccgtggaggaatttcacctcgacctggccaaggccctgcgccatgcc
gggccttggggccagcattttcctgagccgctgtttcatggcgtgttccagttggtggag
cagcgcgtggtgggcgagcggcacctgaaggtggtgctcaagagcgaatgtggctcggtg
cgactggatggcattgcttttggcgtcgaccgcgaagtgtggccgaacccgaccgtgcgc
tgggtcgaactggcgtacaagctggatgtgaacgagtttcgtggcaacgaaagtgtgcag
ttgatgattgcccacatggagccgcgctga
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