Pseudomonas putida H8234: L483_30865
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Entry
L483_30865 CDS
T02706
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pput
Pseudomonas putida H8234
Pathway
pput03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L483_30865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pput03019
]
L483_30865
Messenger RNA biogenesis [BR:
pput03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
L483_30865
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
AGN81007
LinkDB
All DBs
Position
complement(6546814..6547365)
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AA seq
183 aa
AA seq
DB search
MAGALLRSQALWNNAVTCVCEVAAVIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFP
QGGINPDETPEDALYRELNEEVGLERDDVEILACTRGWLRYRLPQRLVRTHSQPLCIGQK
QKWFLLRLVSNEQRVRMDLTGKPEFDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLL
TRD
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggcgcgttgctgcgctcgcaagctttgtggaacaatgcggtgacatgcgtttgc
gaggttgctgccgtgatcgacccggatggttttcgccccaatgtcgggatcattctcacg
aatgatgccgggcaggtgctatgggctcgacggatcaaccaggatgcctggcaatttccc
cagggtggtatcaaccctgacgagacgccggaagatgccctgtaccgcgagctgaacgaa
gaagttggccttgaacgcgacgatgtggaaattcttgcctgcacccgtggctggttgcgt
tatcgtttaccccagcgactggtacgtacccacagccagccgctgtgcatcggccagaag
cagaagtggttcctgctaaggctggtcagcaatgaacagcgggtgcggatggacctgacc
ggcaagccggagttcgacggctggcgctgggtgagctattggtatccgctgggccaggtt
gtgacattcaagcgcgaggtgtaccgacgcgccctgaaagagctagcaccgcgtctgctg
acgcgcgactga
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