Pseudomonas sp. UW4: PputUW4_03085
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Entry
PputUW4_03085 CDS
T02357
Symbol
hcp
Name
(GenBank) type VI secretion system effector, Hcp1 family
KO
K11903
type VI secretion system secreted protein Hcp
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu02025
Biofilm formation - Pseudomonas aeruginosa
ppuu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PputUW4_03085 (hcp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PputUW4_03085 (hcp)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppuu02044
]
PputUW4_03085 (hcp)
Secretion system [BR:
ppuu02044
]
Type VI secretion system
Imp/Vas secretion system core components
PputUW4_03085 (hcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_HCP
Inhibitor_I24
Motif
Other DBs
NCBI-ProteinID:
AFY20280
UniProt:
K9NM40
LinkDB
All DBs
Position
complement(3626852..3627343)
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AA seq
163 aa
AA seq
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MATPIYLWLKNNADDDIKGSVDVQQREGSIEVVAQDHSLYIPTDNNTGKLTGTRVHTPFQ
FSKEIDASSPYFYRAVATGLTLKSAEFKWYRINNDGQEVEYFNTILEKVKVVKVAQKMHD
VKDPSKEKHNHLEEIELRYEKITWTYKDGNVTYSDSWSERPSA
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcccatttacctgtggctgaaaaataacgccgacgatgacatcaaaggttcg
gtggacgtgcaacagcgtgaaggcagcattgaggtggtcgcccaggaccacagcctctac
atccccactgacaacaacaccggcaagttgactggcacgcgggtccataccccgtttcag
ttcagcaaggaaatcgatgcctcaagtccatacttctatagggcggtggccaccggcctg
accctgaaaagcgccgagttcaagtggtatcgcatcaacaatgacggccaggaagtcgag
tacttcaacaccattctggagaaggtgaaggtggtgaaagtcgcgcagaaaatgcacgac
gtgaaagatccgtccaaggaaaaacacaaccacctggaggagatcgagttgcggtacgag
aagatcacctggacctacaaggatggcaacgtcacctactccgactcctggagcgagcgc
ccgagtgcctga
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