Pseudomonas parafulva: NJ69_12440
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Entry
NJ69_12440 CDS
T03520
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
ppv
Pseudomonas parafulva
Pathway
ppv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NJ69_12440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppv03400
]
NJ69_12440
Enzymes [BR:
ppv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
NJ69_12440
DNA repair and recombination proteins [BR:
ppv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NJ69_12440
RecFOR pathway proteins
NJ69_12440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
AIZ33735
UniProt:
A0A0A7JQE1
LinkDB
All DBs
Position
complement(2905495..2906019)
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AA seq
174 aa
AA seq
DB search
MTLILGIDPGSRITGYGVVRHTPRGCEYVASGCIRTGGGELHERLQIVFRGVSEVIRLHG
PVTMGIERVFMARNADSALKLGQARGAAIVAAAEAGLEIAEYTASQVKQSVAGSGGANKE
QVMLMVMHLLKLTQKPQIDASDALAIALCHAHTRSSLVPHGLTTARRRAGRLRL
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgattttaggtatcgaccccggttcgcgcatcaccgggtacggcgttgtacgc
catacgccgcgtggctgcgagtacgtggcttccggatgtatccgcactggcggcggtgag
ctgcatgaacggctgcagatcgtctttcgcggtgtcagcgaggtcatccgcttgcacggt
cccgtcaccatgggcatcgagcgggtgttcatggcgcgcaacgccgactcggcgctcaaa
ctgggccaggcccgtggtgccgccatcgtcgctgccgccgaggcgggactcgagatcgcc
gaatacaccgccagtcaggtcaagcagtcggtggccggaagcggcggggccaacaaggag
caggtgatgctgatggtgatgcacctgctcaagctgactcagaaacctcagatcgatgcc
tccgatgcgctggcgatcgccctgtgccacgcccatacacgctccagtctggtgccgcac
ggcctgacgactgcgcgtcgacgcgcaggccgcttgcgcctgtaa
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