Pseudomonas parafulva: NJ69_18435
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Entry
NJ69_18435 CDS
T03520
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppv
Pseudomonas parafulva
Pathway
ppv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NJ69_18435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppv03400
]
NJ69_18435
Enzymes [BR:
ppv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NJ69_18435
DNA repair and recombination proteins [BR:
ppv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NJ69_18435
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
AIZ34837
UniProt:
A0A0A7JQV4
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All DBs
Position
4214416..4215195
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AA seq
259 aa
AA seq
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MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA
EVPAHGGVALYSRMQPKAVITGLGFETADRYGRYLQADFDKVSIASLLMPSGMNGDEDLN
QKFKLMDDFAKYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLPPERAWMDA
IIGEMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQILTQGLRRCVRNARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtgaatggcattcaggctgcggccgagcgtggtttgctc
agctggttgcaagcccagaatgccgacgtcatctgccttcaggatacccgcgcctcggcc
tttgaactcgacgacccagctttccagctcgatggctatttcctttatgcctgcgacgcg
gaggtgcccgcccacggtggcgtggcgctctactcgcggatgcagcccaaggcagtcatc
accggcctgggcttcgagacagccgaccgctacggacgttacctgcaggccgatttcgac
aaggtcagcatcgccagcctgctgatgccttcgggcatgaacggcgacgaagacttgaat
cagaaattcaagttgatggacgacttcgccaagtacctggacaagcagcgccgcaagcgc
cgcgagtacatctattgcggctcgctgtacgtggcgcagcagaagctcgacatcaagaac
tggcgcgacagccagcagtcgcccggcttcctgccgcccgagcgcgcctggatggacgcc
atcatcggcgaaatgggctacgtcgatgccctgcgcgaagtcagccgcgaaggtgatcag
tacagctggtggccggataacgaacaggccgagatgctcaacctgggctatcgcttcgac
taccagatcctcacccagggcctgcgccgctgcgtacgtaacgcgcgcctgccacgccag
ccgcgcttctcccagcatgcgccgctgatcgtcgactacgactggacgctgaccatctga
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