Pseudomonas putida DOT-T1E: T1E_0415
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Entry
T1E_0415 CDS
T02181
Name
(GenBank) hypothetical protein
KO
K11895
type VI secretion system protein ImpH
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
T1E_0415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppx02044
]
T1E_0415
Secretion system [BR:
ppx02044
]
Type VI secretion system
Imp/Vas secretion system core components
T1E_0415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_TssG
Motif
Other DBs
NCBI-ProteinID:
AFO46274
UniProt:
I7C3J4
LinkDB
All DBs
Position
472335..473258
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AA seq
307 aa
AA seq
DB search
MHGLHGDDLEPRWPDKATRRRVRLACDPRLTFPVSDVYKAQRMPAEEARYRIIATFLGLH
GTDSPLPTYYLEQVAYEHAHGIGVRPAFFDFFNHYLLSLLHRIWRKYRYYIRFQPGASDG
FSQYVFALLGLNDKQLRGDTALPWSRLLSFAGVIASRSRAPGTVAGIIAHCFDLKQVHIR
EFETRSVVTPSRQLARLGRTNGQLGSTFMIGSRTRTRSSKFTIVISELDQTQLRDLLPSG
INFGRLRALIDFLLRDGLAYDLELRLKQSALSPFCLHRSQGAYLGWTSFVDDRHGQISPV
VRIRGRS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttgcacgggctgcatggcgatgacctggaaccccgttggccggacaaggccacccggcgg
cgcgtgcgcctggcctgcgacccacggctgaccttccctgtttcggacgtgtacaaagcc
cagcggatgcccgctgaggaagcgcgctaccgcatcattgccacattcctggggttgcac
ggcaccgattcgccattgcccacctattacctggaacaggtggcgtatgaacatgcgcat
ggcatcggtgtacggccggccttcttcgactttttcaaccattacctgctcagcctgttg
caccgtatctggcgcaagtaccgctattacatccgcttccagccaggtgccagtgacggg
ttctcgcagtacgtgtttgccctgcttgggcttaacgacaagcagttgcgaggggacacg
gcgctgccctggagccgcctgctcagttttgccggcgtgatcgccagccgcagccgtgcg
ccgggcactgtggccggcatcattgcgcactgcttcgacctcaagcaggtgcacatccgc
gagttcgagacgcgatcagtcgtcacgccgtccaggcagcttgcaaggctggggcggacc
aacggccagctgggcagcacgttcatgatcggcagccgcacgcgcactcgcagcagcaag
ttcaccatcgtgatcagcgaactcgaccagacacagctgcgggacttgctgcccagcggc
atcaacttcggccgtttgcgtgcactgatcgactttctgctgcgtgacgggctggcctac
gacctggaactgcgccttaagcagagcgcgttgtcccccttctgcttgcaccgcagccag
ggcgcatacctgggctggaccagcttcgtcgacgaccggcatggccagatcagcccggtt
gtacgcatccgggggcgctcatga
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