Pseudomonas putida DOT-T1E: T1E_2589
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Entry
T1E_2589 CDS
T02181
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppx03019
]
T1E_2589 (orn)
03009 Ribosome biogenesis [BR:
ppx03009
]
T1E_2589 (orn)
Messenger RNA biogenesis [BR:
ppx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
T1E_2589 (orn)
Ribosome biogenesis [BR:
ppx03009
]
Eukaryotic type
Pre-60S particles
RNases
T1E_2589 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AFO48431
UniProt:
I7C5R3
LinkDB
All DBs
Position
2833909..2834451
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AA seq
180 aa
AA seq
DB search
MQNPQNLIWIDLEMTGLDPDSDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGASGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMR
NLENYFHYRNLDVSTLKELAARWAPDVRDSFKKGNTHLALDDIRESIAELRHYREHFIKL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccacagaacctgatctggatcgacctggaaatgaccggcctggatccggac
agcgacgtcatcatcgaaatggccaccatcgtcaccgacagcgagctcaataccttggcc
gaaggcccggtgatcgccatccaccacagtgacgaagtgctggcgcgcatggacgagtgg
aacacccgcacccatggcgcttcggggctgacccagcgcgtgcgcgagagcaaggtcagc
atggccgaagccgaggcacagaccatcgccttcctcgagcagtgggtgcctaaaggcaag
tcgccgatctgcggcaacagcatctgccaggatcgtcgtttcctctaccgccacatgcgc
aacctggaaaactacttccactaccgcaacctggatgtctccaccctcaaggagctggcc
gcgcgctgggcgccggacgtgcgtgacagcttcaagaagggcaatacccacctggcgctg
gacgatatccgcgaatcgatcgccgaactgcgtcactatcgcgagcacttcatcaagctg
tga
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