KEGG   Pseudomonas putida DOT-T1E: T1E_2589
Entry
T1E_2589          CDS       T02181                                 
Symbol
orn
Name
(GenBank) Oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
ppx  Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:ppx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppx03019]
    T1E_2589 (orn)
   03009 Ribosome biogenesis [BR:ppx03009]
    T1E_2589 (orn)
Messenger RNA biogenesis [BR:ppx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     T1E_2589 (orn)
Ribosome biogenesis [BR:ppx03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    T1E_2589 (orn)
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: AFO48431
UniProt: I7C5R3
LinkDB
Position
2833909..2834451
AA seq 180 aa
MQNPQNLIWIDLEMTGLDPDSDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGASGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMR
NLENYFHYRNLDVSTLKELAARWAPDVRDSFKKGNTHLALDDIRESIAELRHYREHFIKL
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcaaaacccacagaacctgatctggatcgacctggaaatgaccggcctggatccggac
agcgacgtcatcatcgaaatggccaccatcgtcaccgacagcgagctcaataccttggcc
gaaggcccggtgatcgccatccaccacagtgacgaagtgctggcgcgcatggacgagtgg
aacacccgcacccatggcgcttcggggctgacccagcgcgtgcgcgagagcaaggtcagc
atggccgaagccgaggcacagaccatcgccttcctcgagcagtgggtgcctaaaggcaag
tcgccgatctgcggcaacagcatctgccaggatcgtcgtttcctctaccgccacatgcgc
aacctggaaaactacttccactaccgcaacctggatgtctccaccctcaaggagctggcc
gcgcgctgggcgccggacgtgcgtgacagcttcaagaagggcaatacccacctggcgctg
gacgatatccgcgaatcgatcgccgaactgcgtcactatcgcgagcacttcatcaagctg
tga

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