KEGG   Pseudomonas putida DOT-T1E: T1E_4948Help
Entry
T1E_4948          CDS       T02181                                 

Gene name
gatB
Definition
(GenBank) Aspartyl/glutamyl-tRNA
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
ppx  Pseudomonas putida DOT-T1E
Pathway
ppx00970  Aminoacyl-tRNA biosynthesis
ppx01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ppx00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    T1E_4948 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:ppx03029]
    T1E_4948 (gatB)
Enzymes [BR:ppx01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     T1E_4948 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     T1E_4948 (gatB)
Mitochondrial biogenesis [BR:ppx03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    T1E_4948 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey
Motif
Other DBs
NCBI-ProteinID: AFO50773
UniProt: I7BG67
LinkDB All DBs
Position
complement(5397097..5398542)
Genome map
AA seq 481 aa AA seqDB search
MQWEVVIGLEIHTQLATQSKIFSGSATTFGSEPNTQASLVDLGMPGVLPVLNEEAVRMAC
MFGLAIDAEIGKRNVFARKNYFYPDLPKGYQISQMDLPIVGKGHLDIALEDGTIKRIGVT
RAHLEEDAGKSLHEDFSGSTGIDLNRAGTPLLEIVSEPDMRSAKEAVAYVKAIHALVRYL
GICDGNMAEGSLRCDCNVSIRPKGQTEFGTRCEIKNVNSFRFIERAINSEIQRQIDLIED
GGKVVQETRLYDPNKDETRSMRSKEEANDYRYFPDPDLLPVVIEDSFLETIRAGLPELPP
QKVERFQTQYGLSAYDANVLASSREQADYFEEVVKIGGDAKLAANWVMVELGSLLNKLGV
EIDQAPVSAAQLGGMLLRIRDNTISGKIAKTVFEAMAAGEGDADSIIESKGLKQVTDTGA
IDKMLDEMLAANAEQVEQYRAADEAKRGKMFGFFVGQAMKASKGKANPGQVNQLLKAKLE
G
NT seq 1446 nt NT seq  +upstreamnt  +downstreamnt
atgcaatgggaagttgtgatcgggctggaaatccacactcagctcgccacccagtcgaag
atcttctccggcagcgctaccacctttggctccgagccgaatactcaggccagcctggtt
gacctgggcatgcccggcgtactgccggtactgaacgaggaggccgtgcgcatggcgtgc
atgttcggcctggccatcgatgccgaaatcggcaagcgcaacgtgttcgcacgcaagaac
tacttctaccccgacctgcccaagggctaccagatcagccagatggacctgccgatcgtc
ggcaagggccacctggacatcgcgctggaagacggcaccatcaagcgcatcggcgtaacc
cgcgcgcacctggaagaagacgccggcaagagcctgcacgaagacttcagcggctccacc
ggcatcgacctgaaccgtgccggcaccccgctgctggaaatcgtctccgagcctgacatg
cgcagcgccaaggaagccgtggcttacgtcaaggcaatccacgcgctggtgcgctacctg
ggcatctgcgacggcaacatggccgaaggttcgctgcgctgcgactgcaacgtatcgatc
cgcccgaaaggccagaccgagttcggcactcgctgcgaaatcaagaacgtcaactcgttc
cgttttatcgagcgcgcgatcaacagcgaaatccagcgccagatcgacctgatcgaagac
ggtggcaaagtcgtgcaggaaacacgcctgtacgacccgaacaaggacgaaacccgctcc
atgcgcagcaaagaggaagctaacgactaccgttacttccccgaccccgacctgctgccg
gtggtcatcgaggacagcttcctcgaaaccattcgcgccggcctgccggagctgccgcca
cagaaggtcgagcgcttccagactcagtacggtctgtcggcctacgacgccaacgtgttg
gcttccagccgcgaacaggctgactacttcgaagaagtggtgaagatcggtggtgatgcc
aagctggcggccaactgggtcatggtcgaactgggtagcctgctgaacaagctgggtgtc
gaaatcgatcaggcgccggtcagcgctgcgcaactgggcggcatgctgctgcgcattcgt
gacaacaccatcagcggcaagattgccaagaccgtgttcgaggccatggccgccggtgaa
ggcgatgccgacagcatcatcgagagcaaaggcctgaaacaggttaccgacacgggtgcg
atcgacaagatgctcgacgaaatgctggcagccaatgccgagcaggtcgaacaatatcgc
gcagccgatgaggccaagcgcggcaagatgttcggcttcttcgtcggtcaggccatgaaa
gcctccaaaggcaaggccaacccggggcaggtgaaccaattgctcaaggccaagctcgaa
gggtga

DBGET integrated database retrieval system