Pseudomonas putida DOT-T1E: T1E_5734
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Entry
T1E_5734 CDS
T02181
Name
(GenBank) radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx00790
Folate biosynthesis
ppx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
T1E_5734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppx03016
]
T1E_5734
Enzymes [BR:
ppx01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
T1E_5734
Transfer RNA biogenesis [BR:
ppx03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
T1E_5734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AFO51555
UniProt:
I7B8L1
LinkDB
All DBs
Position
6235089..6235736
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AA seq
215 aa
AA seq
DB search
MQDTLRITEVFYSLQGETRTAGLPTVFVRLTGCPLRCQYCDSAYAFSGGTVRTLDSILEQ
VAGFKPRYVCVTGGEPLAQPNALPLLQRLCDAGYEVSLETSGALDIAGTDTRVSRVVDLK
TPGSEESHRNRYENIEQLTRNDQVKFVICSREDYDWAVSKLIQYNLAERAGEVLFSPSHH
QVNASDLADWIVADNLPVRFQLQLHKLLWNDEPGR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacacattacgcatcaccgaagtcttttactctttgcagggtgagacgcgaacg
gccgggctgcctacggtatttgtgcgcctcaccggttgccccctgcgttgccagtactgc
gacagtgcctatgccttcagtggcggtaccgttcgcacccttgattcgatccttgagcaa
gtggccggcttcaagccgcgctacgtctgtgtcaccggtggcgaaccgctggcccagccc
aacgccttgccattgctgcagcggctgtgtgacgcgggttacgaggtgtcgctggagacc
agcggcgcgctggatattgccggcaccgacacccgcgtcagccgtgtggtcgacctgaaa
accccaggctccgaagagtcgcaccgtaaccgctacgagaacatcgagcagctgacgcgc
aacgaccaggtcaagttcgtcatttgttcccgtgaggattatgactgggcggtatccaag
ctgatccagtacaacctggcagagcgtgccggtgaggtgttgttctcacccagccatcat
caggtgaacgccagtgacctggctgactggatcgttgctgacaacctgcccgtacgcttc
caacttcagctgcacaagctgctgtggaacgacgagcccggacgttga
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