Paenibacillus polymyxa E681: PPE_03875
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Entry
PPE_03875 CDS
T01319
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
ppy
Paenibacillus polymyxa E681
Pathway
ppy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PPE_03875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppy03400
]
PPE_03875
DNA repair and recombination proteins [BR:
ppy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PPE_03875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
UVR
HHH_2
FG-GAP_2
5_3_exonuc
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
ADM71672
UniProt:
E0RBW4
LinkDB
All DBs
Position
complement(4224710..4226827)
Genome browser
AA seq
705 aa
AA seq
DB search
MKPYAEDLQNQEKALENIRHKLALLPDASGCYLMKNSEGTIIYVGKAKVLKNRVRSYFTG
SHNGKTQRLVSDIRDFEYIVTGSNMEALILECNLIKKYQPRYNVLLKDDKTFPYLKITNE
AHPKLEVTRRVLKDKAKYFGPYPNSYAAHQTKKLLDRMYPLRKCGVMPKEVCLYYHMHQC
LGPCVKEVEKETYDQIGQEIGSFLSGGHEEIKKDLQRKMQEAAEELYFERAKELRDQIIS
IDAMMEKQKITTSDAKDRDVFGFSVDKGWMCVQILYVRKGKMIERHMSTFPFYGEAYSDF
MSYVTQYYSDNPAVPQEILLPDSPKMMQAEQVNVDQPVAAETALHSAPTADATGQTDDKA
IQTEIAPDASNVQYSLKHSADSLLVAEERAAYAVATNQGQVGDQDAEIKETETQLSGGLE
DPATAALALAEWLDVKVLVPQRGLKKQMTGMATENARVALDEKFKLIERDEERTSKAASN
LGRAIGLDSLHRVEAFDNSNIQGSDPVSAMIVFIDGKPAKKEYRKYKIRSVQGPDDYETM
REVIRRRYERVLKENLERPDLIVVDGGRGQIKAATDVLQNELGLFIPVCGLVKDAKHRTS
QLLVGESSEAVTLARNSEEFYLLQRIQDEVHRFAITFHREQRGKSMVTSRLDSIPGIGEK
RRKLLLKHFGSLKKIREASVEDFRPLSIGDKLARQIIAALREEES
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccttatgcggaggacttgcagaatcaggagaaggcgctggagaacatacggcac
aaattagcgttactgccggatgcatcaggctgttacctgatgaagaatagcgaaggcacc
attatttatgtcggcaaggccaaagtgttgaaaaaccgggtccgttcctattttacaggt
agccataacggcaagacgcagcgactggtttccgatatccgtgattttgaatatatcgtt
acaggcagtaatatggaggcgctcattttggagtgcaacctcattaaaaagtaccagccg
cgttataatgtgctattgaaggatgataaaacctttccgtatttgaaaattacgaacgag
gcacaccccaagctggaggtgacccgtcgcgttctgaaagataaagcaaaatattttgga
ccgtaccccaattcctacgcagcacatcagacgaagaagctgctggatcgtatgtatccg
ttacgcaagtgtggtgtgatgccaaaagaagtgtgtctgtattatcacatgcatcaatgt
ttggggccttgtgtgaaagaggtcgagaaggaaacgtatgaccagattggtcaggagatt
ggttcctttttgagcgggggacatgaggaaattaaaaaggaccttcagcgtaaaatgcag
gaggccgcagaggaattgtattttgagcgggccaaggagctgcgagatcagattatcagc
atcgacgcgatgatggaaaagcagaaaatcaccacatcggatgcgaaagatcgagatgta
ttcggtttttcagtagataagggctggatgtgtgtacagatcctatatgtccgcaaaggt
aaaatgatcgagcgccatatgtcgacttttcctttctacggtgaggcttacagtgatttt
atgtcctatgtgacgcaatattatagtgacaacccagcagtgccgcaggaaatattgctg
ccggattctcctaagatgatgcaggcggaacaggtcaatgtcgatcaaccggttgcggca
gaaactgcactccacagtgcacctacagccgatgctaccggacagacagatgacaaagcg
atacaaacggagatagcaccggatgcgtcaaacgtacaatattcgttaaagcattctgct
gactcattgctggtagctgaagaacgagcagcttatgcagtagcaacgaatcaaggtcaa
gttggtgaccaagatgcagagataaaggaaacagaaacccaactatccggtggactggag
gacccagctacggcggctctcgctctggctgaatggttggatgttaaggtacttgtaccg
cagcgtggactgaaaaagcaaatgacaggcatggcgacggaaaatgcacgtgttgctttg
gatgagaagtttaagctgatcgagcgggatgaggaacggacatccaaagctgcaagcaat
ctcggtcgtgccattgggctggatagcttgcaccgggtggaggcgtttgataactccaac
atccagggttccgatccagtctccgccatgatcgtatttattgatggtaagcctgccaag
aaggagtatcgaaaatataagatccgttctgtgcagggacctgatgattatgaaacgatg
cgtgaggttattcggcgtagatatgaacgtgtgcttaaggaaaatctggaacgtcccgac
ttgatcgttgtggatggtggacgtggacaaattaaggcggcgaccgatgtactgcaaaat
gagctgggtttgttcattcctgtatgtggtttggtgaaggatgccaaacatagaacatcc
caactattggtcggagaatcctctgaggccgtgacacttgcacgtaatagcgaagaattt
tacctgctgcaacggattcaggacgaggttcaccgtttcgccatcacgttccaccgcgag
caacgcggcaaatctatggtaacttcccggctggactctattccaggcattggcgagaaa
cggcgtaagttactgcttaagcattttggatcgctcaaaaaaataagagaggccagtgtc
gaagacttccggcctctctctattggggataagcttgcgcgtcagattatagctgccctt
cgggaggaggagtcgtag
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