Paenibacillus polymyxa E681: PPE_04309
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Entry
PPE_04309 CDS
T01319
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppy
Paenibacillus polymyxa E681
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppy03400
]
PPE_04309
DNA repair and recombination proteins [BR:
ppy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PPE_04309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Rubredoxin_2
ChlI
DnaB_C
Lon_C
AAA_16
AAA_22
NTPase_1
nSTAND3
KdpD
AAA_24
ADH_zinc_N
AAA_14
AAA
ATPase_2
HypA
SLFN-g3_helicase
AAA_5
NACHT
divDNAB
Motif
Other DBs
NCBI-ProteinID:
ADM72073
UniProt:
E0RGR3
LinkDB
All DBs
Position
complement(4685138..4686511)
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AA seq
457 aa
AA seq
DB search
MAKVKTKFSCTECGYESPKWYGKCPGCQAWNSMVEETESVVKTQGMGSSLLTHSTKDKPL
PIIEVESGKETRILTGIGELNRVLGGGVVPGSLVLVGGDPGIGKSTLMLQTSNELALTGL
KVLYVSGEESVRQTKLRADRLGALSPSLYVLCETNLETIEEAVDSLKPEFLVIDSIQTVY
LPEVTSAPGSVAQVRECTSRFMRIAKGLGIATVLVGHVTKEGAIAGPRLLEHMVDCVLYF
EGERHHTYRLLRAVKNRFGSTNEIGIFEMAESGLREVSNPSELFLSERPLGVAGSTVVAS
MEGTRPVLVELQALIAATHFPSPRRMGTGVDHHRMGLIIAVLEKRMGMFLQNQDAYLNVA
GGVKLDEPAVDLAIAVSIASSFRDAPTKPYDVIFGEVGLTGEVRAVSRAEQRVREAEKLG
FKRVIMPEKSLKGWTHPKGIQIIGVGTVADALAAALD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtgaaaactaaattttcctgtacagaatgtggttatgaatcgcccaaatgg
tacggaaaatgtcctggatgccaggcatggaattccatggtcgaagaaacggaaagcgtt
gtaaaaactcaaggaatggggtcttcccttcttactcatagcacaaaagacaagccactc
cctatcatagaggtggagagtggcaaagaaacacgaattttgacgggaattggcgaattg
aatcgagtacttggtggaggtgtggtgccgggttcactcgttttggtgggtggtgatccg
ggaatcggtaaatctacgcttatgctgcaaacatctaatgagctggctttaactggttta
aaggtgctgtacgtgtctggtgaggaatctgtccgtcaaacgaaactacgtgcagatcga
ctcggtgccttgtcccccagcctatacgtattatgtgagaccaatttggagacgattgaa
gaagcggtggacagcttgaagccggagtttttggtcatcgactcgatacagaccgtatat
ttgcctgaggtgacgagtgcaccaggtagtgtggctcaagtgcgggagtgtacttcgcgc
tttatgcgaattgccaaggggctaggtattgctacggtattggtgggacatgtgaccaag
gaaggggccattgcaggtccacgtttgttggaacatatggtcgattgtgtgctttatttt
gaaggagagcgtcatcatacgtatcggcttttgcgtgcagttaaaaatcgtttcggttct
acaaatgaaattggtatttttgaaatggctgaaagcggtttgcgtgaggtgtcgaatcct
tctgaactattcctgtctgaacgaccactgggggtggcgggttctactgttgtagccagt
atggagggaacccgacctgtattggttgaactgcaagcattgattgcagctacgcatttt
ccatctccgcgccgaatgggcacaggagtcgaccatcatcgaatgggattaatcatagcc
gtgctagaaaagcggatgggcatgtttttgcaaaaccaggacgcttatctcaacgtagcc
ggaggcgtgaagttggatgaaccggcggtggatttggctatagctgtgagcattgcttcc
agctttagggatgctcctacaaagccgtacgatgtgatttttggcgaggtgggactgaca
ggcgaggtgcgcgcggtatcccgagcagaacagcgagtacgggaagcggagaaactaggt
ttcaaacgggtgatcatgccggagaaaagcttgaagggctggacacatccgaaagggata
caaattataggagtaggaacggtggcagatgcactggcagccgcattagattag
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