Pseudomonas poae: H045_06785
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Entry
H045_06785 CDS
T02456
Name
(GenBank) type VI secretion protein TssC2
KO
K11900
type VI secretion system protein ImpC
Organism
ppz
Pseudomonas poae
Pathway
ppz02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
H045_06785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppz02044
]
H045_06785
Secretion system [BR:
ppz02044
]
Type VI secretion system
Imp/Vas secretion system core components
H045_06785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
AGE25429
LinkDB
All DBs
Position
1472511..1473986
Genome browser
AA seq
491 aa
AA seq
DB search
MNTQATSLAAPRADESSILDNIIAQTLLTADDEAYGIAKRGVSAFIEELVKPHNSAEPVK
KRLVDRMIAEIDSKLSRQMDEILHHPQFQALEAAWRGLQLLIERTNFRENIKIELLNVSR
ADLLDDFEDSPEVNQSGLYKHIYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYVSTV
ACVAHAPFIAAAGPAFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYIGLTVP
RFLLRTPYDPLESPVKTFAYQENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGP
QSGGAVEDLPLHHFHSMGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSA
SSVQKPKYFGTSVEGREAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVDGEPGWYRVNLSVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaacactcaagccacctcactggctgctcccagggcagacgagtcgagcatcctcgac
aacatcattgcgcagaccctgctgacggcggatgacgaggcctacggtatcgccaagcgc
ggtgtctcggcgtttatcgaagagttggtcaagccgcacaacagcgcagaaccggtcaaa
aaacgcctggtggaccggatgatcgccgagatcgacagcaagctcagcaggcagatggac
gaaattctccatcacccgcagttccaggcactggaagctgcctggcgaggtttgcagttg
ctgatcgagcgaaccaatttccgtgaaaacatcaagatcgaactgctgaatgtatcccga
gcggacttgctcgatgacttcgaggactcgccggaagtcaaccagtccgggctctacaag
catatctacagtgccgagtacggccagttcggtggtcagcccgtgggcgccatcatcgcc
aactatttcctttcacccagtgcgcccgacgtaaagctcatgcagtacgtttcgactgtc
gcttgcgtggctcacgcgccttttatcgcagcggccgggccagccttttttggcctggaa
agctttaccggtctgcctgacctgaaggacctcaaggatcatttcgaaggcccgcaattt
gccaaatggcagagctttcgtcagagcgaagacgcgcgctacatcggcctcaccgtaccg
cgctttttgctgcgcacgccttacgatccccttgaatctccggtcaagacctttgcctat
caggaaaacgtggtcaacagtcacgagcactatctgtgggggaatacggcttatgcattt
gccacacgcttgaccgacagcttcgccaggtttcgttggtgtcccaacatcattggtccg
caaagcggcggggcggtggaagacctgcccttgcaccactttcacagcatgggtgaaatc
gaaacgaagatccccactgaggtgctggtctccgatcgacgcgaatatgaactggcccag
gaggggttcatcgcgttgaccatgcgcaaaggcagtgacaatgcggcatttttctccgca
agttcggtgcagaagcccaagtatttcggcaccagtgtcgaggggcgggaagcggagttg
aattaccggctgggcactcagttgccgtacatgatggtggtcaaccgactggctcattac
ctgaaagtgttgcagcgcgagcagttggggtcgtggaaggaacgcaccgacctggaactt
gaactcaataaatggattcgtcagtacgtcgcagaccaggaaaaccccagtgccgaggtg
cgtggtcgtcgacccctgcgtgcggcacgcatcgttgtcagcgatgttgacggtgagccc
ggctggtatcgcgtcaatctgagtgtgcggcctcacttcaaatatatgggggcggacttc
acgctttcccttgtcggcaagctcgacaaagaatga
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