Pseudomonas poae: H045_09645
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Entry
H045_09645 CDS
T02456
Name
(GenBank) putative exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppz
Pseudomonas poae
Brite
KEGG Orthology (KO) [BR:
ppz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppz03400
]
H045_09645
DNA repair and recombination proteins [BR:
ppz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H045_09645
Archaeal homologous recombinant proteins
H045_09645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AGE25996
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All DBs
Position
2194132..2195373
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AA seq
413 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLAWLLGQLKAHSPDVLLIAGDIFDTVNPPLKAQ
ERLYDFIISAHEQNPELTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDA
ERLLIPLPTAKGKIAGWCLALPFLRPAEVTGAHLGDDYLRGIGQVHEWLIAAANAKRKKG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFDKTVGYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYKHQILDVMFQGERLVSVEPLLIPRAVNLLRLDAAPLADILKAL
AELPDIDLLAETQRHPWLEVRVRLDEPQPDLRQQIEAALQGKAVRLVRIAAEYAGKRGQD
DNDDARLIELDQLTPQELFSRAWHDSYGSEVDEQTLNDFAVLLQEVQQEEQQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcacacctccgactggcacctgggccaaaacctccatggccaggaacgc
gacttcgaacacgcctgcttcctggcgtggctgctgggtcagctcaaggctcatagccct
gacgtgctgctgatcgccggcgatatcttcgacacggtcaacccgccactcaaggctcag
gagcggctgtatgatttcatcatcagcgcccacgaacaaaatcccgaactgaccatcgtg
atgatcgccggcaaccatgactccggctcgcgcatcgagttgcccgcgccgttgatgcgc
cgtctgcgcacccatgcgctgggccgggtgctgtggctggatgacgggcaactggatgcc
gagcgcctgctgattcccttgcccacggccaaaggcaagattgccggctggtgcctcgca
ctgcccttcctgcgcccggcggaggtcaccggcgcccacttgggcgacgattacttgcgc
ggtatcggccaagtgcatgaatggctgatcgccgccgccaacgccaagcgcaaaaaaggc
caggcgctgattgccatcagccatgcgcatatggccggcggttcggtctcggaagattcc
gagcgcagcctgatcatcggcaacgccgaggcgctgcctgccagtctgttcgataaaact
gtcggttacgtagccctcggccatttgcacaagccacaaaaggtgaatggcgaagagcgc
attcgttatagcggctcgccaattccgctgtcgttttccgagatcggctacaaacaccag
attctcgacgtgatgttccagggcgaaagactggtcagcgtcgaaccgctgctgatcccg
cgcgcggtcaacctgcttcgcctggacgccgcgccgctggctgacattctcaaagcgctg
gcagagctgcccgacattgacctgctcgccgaaacccagcgtcacccttggctcgaagtg
cgtgtgcgcctggatgagccgcagccggacctgcgccagcaaatcgaagccgccttgcag
ggcaaggccgtgcgcctggtgcggatcgccgccgaatacgccggcaagcgcggtcaggac
gacaacgacgacgcacgactgatcgaactcgaccagctcacgccccaggaattgttcagc
cgcgcctggcacgacagctacggcagtgaagtggacgagcagaccctcaatgacttcgcc
gtgctgctccaggaagtgcaacaggaggagcaacagccatga
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