KEGG   Cutibacterium avidum: PALO_05315Help
Entry
PALO_05315        CDS       T02632                                 

Gene name
gatB
Definition
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
pra  Cutibacterium avidum
Pathway
pra00970  Aminoacyl-tRNA biosynthesis
pra01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pra00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    PALO_05315 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:pra03029]
    PALO_05315 (gatB)
Enzymes [BR:pra01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     PALO_05315 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     PALO_05315 (gatB)
Mitochondrial biogenesis [BR:pra03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    PALO_05315 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey Glycos_trans_3N Ald_Xan_dh_C2 YqeY
Motif
Other DBs
NCBI-ProteinID: AGJ77673
LinkDB All DBs
Position
complement(1173472..1174965)
Genome map
AA seq 497 aa AA seqDB search
MADELLPYDEVMADYEPVIGLEVHVELSTATKMFCGCSTDTEKDPNTNVCPVCLGLPGSM
PAINGHAVESAIRIGLALNCKIAEWCRMARKNYFYPDMTKNYQTSQYDEPICYDGCLDVE
VDGEVFRVEIERAHMEEDAGKSLHVGGSDGRISGASHSLMDYNRAGVPLIEIVTRPIRGL
GAKAPQVARAYMAQLRDIMVALGVSEARMERGNLRCDANVSLMPRGSSTLGTRTETKNVN
SLRSVEGALTYEIQRQGFVLAEGRKVRQQTRMWQESGEYTIAGRDKSDAEDYRYFPEPDL
VPVAPSREWVEELRAGLPELPAAKKARLASQWQFSELEMTAVVNAGALDLLEETVNAGCQ
PAAARKWWLTELSRRANEAEVDLSEVGMSPAQVAQLQKLVDDGTLTDKLARQVIDGVIAG
EGDPQQVVDGRGLAVVSDDAALGAAVDDVIAANPQIAEKIRGGKVQAAGALIGQVMKAMR
GQADAKRVRELILEKLS
NT seq 1494 nt NT seq  +upstreamnt  +downstreamnt
atggcggacgagctgctgccctatgacgaggtgatggctgactacgagccggtcatcgga
cttgaggtccacgtcgagctgtcgacggcgaccaagatgttctgcggatgttccacggat
accgagaaggatcccaacaccaacgtctgcccggtctgcctgggtcttcccggatcgatg
ccggccattaacggccacgccgtcgagtcggccatccgcatcggtctggccctcaactgc
aagatcgccgagtggtgccgcatggcccggaagaactacttctacccggacatgacgaag
aattaccagacctcgcagtacgacgagccgatctgctacgacggctgtctcgacgtcgag
gtcgacggcgaggtcttccgtgtcgagatcgagcgtgcccacatggaggaggacgccgga
aagtccctgcacgtcggcggatctgacggacgtatttccggtgccagccactctctcatg
gactacaaccgcgccggcgtcccgctcatcgagatcgtcaccaggccgatccgtgggctg
ggagccaaggcgccgcaggtggcacgggcctacatggctcagctgcgcgacatcatggtc
gccctgggcgtctccgaggccaggatggagcgaggcaacctgcgttgtgatgccaacgtc
tccctcatgccacgcggaagcagcaccttgggcacccgtaccgagaccaagaacgtcaac
tcgctgcgctcggtcgaaggagccctgacctacgagatccagcgtcagggattcgtgttg
gccgagggacgcaaggttcgtcagcagacccggatgtggcaggagagcggcgaatacacc
atcgccggacgcgacaagtccgacgccgaggactaccgctacttccccgagccggacttg
gttccggtcgcgccgtcccgggaatgggtggaggagctgcgtgctggcctgccggaactt
ccagctgccaagaaagctcgtctggcctcccagtggcagttctccgagctggagatgact
gcggttgtcaatgccggcgccctcgacctccttgaggaaaccgtcaacgctggctgccag
cccgctgccgcgcgcaagtggtggctcaccgagctgtctcgtcgtgccaacgaggccgag
gtggacctgtccgaggtcggtatgtccccggcccaggtcgcccaactgcagaagctcgtt
gacgacggtaccctcaccgacaagctggcccgccaggtcatcgacggtgtcatcgctggc
gagggagatcctcagcaggtggtcgatggacgcggtctcgccgtcgtctccgatgacgcc
gcccttggtgctgctgttgacgacgtcatcgctgccaacccgcagattgccgagaagatc
cgtggtggcaaggtccaggcggctggtgctctcattggtcaggtcatgaaggccatgagg
ggtcaggcagacgcgaagcgggtcagggagctcatcctcgagaagctctcctga

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