Pieris rapae (cabbage white): 110992603
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Entry
110992603 CDS
T05162
Name
(RefSeq) transcription factor collier isoform X1
KO
K09103
early B-cell factor
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prap03000
]
110992603
Transcription factors [BR:
prap03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
110992603
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
110992603
NCBI-ProteinID:
XP_022114178
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Position
9:complement(1330437..1384177)
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AA seq
566 aa
AA seq
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MFGLHHQEAAGVHTQPRGPVTSLKEEPLTRAWMTPSSLVDNTNSVGVGRAHFEKQPPSNL
RKSNFFHFVVALYDRAGQPIEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQ
EQDIFVRLIDSVTKQPIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVI
IDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGR
RAKRLDPTEGTEAAIEPTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQ
VVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPT
IDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMP
FNSYTGQLAVSVQDSAASQWTDEEYARSGGGSVSPRYCSAASTPHASYPHPQHYPAPTSI
FNTTSLSLGPYHPANMNGHLTDQYNTYPKDSDYIERNVESKDDCPANTHTKCDAMKGQTK
EKRSGFAVVRQSPPHFQQNWQHLTVQ
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcctacatcaccaggaggctgcgggggtacatacacagcctcgaggaccggtc
acatcgctcaaagaagagccactcactcgagcatggatgacccccagctccttagttgac
aataccaatagcgtgggtgtgggtcgagcgcacttcgagaagcagcctccgagcaaccta
cgcaagagcaacttcttccatttcgtggtcgcgttgtatgatcgggcgggacaaccaatc
gaaattgagcgcactgcattcataggatttatagaaaaggaccaagaagccgaaggacaa
aaaacaaacaacggaattcaatataggcttcaattgctttatgcaaatggcatcagacag
gaacaggatatattcgttcggcttatagactccgttaccaaacagcccatcgtctatgaa
ggtcaggacaaaaatccagaaatgtgcagggttttgttgacacacgaggtcatgtgcagt
cgttgctgtgataagaagagttgtggaaatagaaatgaaaccccgtcagatcctgttata
attgaccgattttttctaaagttcttcttgaaatgcaatcaaaactgcttgaagaatgct
ggcaatcctagggatatgagaagatttcaggtggtgatatcaacacaggtgatggtagac
ggcccgctattagcaatatcagataatatgtttgttcataataacagcaaacacggccgt
cgagcgaaacggctagaccctacagaaggtacagaagctgcaatcgagcctacttcgggt
ctatatccaccgttgccagtagcaacgccatgcatcaaagcaatatctccaagtgaagga
tggacatcgggaggttcgaccgttatcatagtgggcgacaatttcttcgatggccttcaa
gtagtatttggtactatgctggtgtggagtgagttgataacatcacatgcgattcgagta
cagacaccgccgaggcatatcccaggtgttgtagaagtaacgctgtcatataagagtaaa
cagttctgtaagggtgcacctggaagattcgtttatgtttcagcactcaacgagcccacg
atagattacggctttcagaggcttcagaaacttataccgagacatcccggcgatccggag
aaactgccaaaggaaataattcttaaacgggcagcggacttagcagaggcattgtattcg
atgccccgaaataaccaattaggtctgggtgcgcccaggtcacctcctgccagtatgcct
ttcaactcctatactggccaattagctgttagtgttcaggattccgctgcttcccagtgg
acagacgaggagtacgcgcgtagtggcggaggttccgtatcgcctcggtactgctcggcc
gcgtccactccgcacgcctcttacccccatccacagcattacccggcaccgacctccatc
ttcaacaccacatcactgtctctggggccatatcatccggcgaatatgaatggacactta
actgaccagtataatacgtacccaaaagatagcgattacattgaaagaaacgtggagtct
aaagatgactgtcccgcaaacactcatacgaaatgcgatgctatgaaagggcaaacgaaa
gagaagagaagcgggttcgcggtcgtaagacaaagtccgccgcattttcaacaaaattgg
caacatctcaccgttcagtga
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