Pieris rapae (cabbage white): 110995288
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Entry
110995288 CDS
T05162
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110995288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
110995288
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110995288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
110995288
NCBI-ProteinID:
XP_022118066
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Position
19:complement(5674459..5679897)
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AA seq
467 aa
AA seq
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MADAAVETTNNDENDDSWLYGDSNTDQNEDAEGQQKAPESAKQQTTSIGETGEQEDKEPE
EEGNDDSHFNDEHFGEVEREEGGETNGDADSQDNGDSDSDDSDDVKVTIGEIKSGPQAYA
SLNIKRGVGLVASGGEKTRPGPTAGGKVNLEDLEGPGSINGVPALEFNIDTIEDKPWNKP
GADISDYFNYGFNEVTWSAYCERQRRMRVNEAGVGLHVGPTAPEMRRPTGPVRHDDGPPP
MQNNYQSRENTIQVMTAERREYGRGTGAPPTDYFQPPEHFYPPHNYQEPVWGAPEQTGWA
PTEIKELTPGPMAPPAMVPPIGVAPTMAPPHMGAPPHPMGAPFSPYRPPPMHVHDRERDR
DRDRDRDRDRDRDRDRIREREERDRRERDRREEDEREHRERSRSIKPDRSREKSYRRERS
RSRSRRHKSRSRSPRPRERSRDRDRSRDRERSTKPKSKESKEKEDDK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgctgctgttgaaacaacaaataatgatgaaaatgatgattcgtggttgtac
ggtgattctaacactgaccaaaatgaagatgccgaagggcaacaaaaagctcctgaaagt
gctaaacaacaaacaacttctataggtgaaactggggagcaagaagataaagaaccagaa
gaagaaggtaatgatgattcacattttaatgatgagcattttggtgaagtggaacgtgag
gaaggtggcgagacaaatggagatgccgatagtcaagacaatggagattctgactctgat
gatagtgacgatgttaaagttaccattggagagattaagtctggtcctcaggcgtatgct
agcttaaatataaagcgaggagttggattagtagcatcaggtggtgagaaaacacgacca
ggccccacagctggaggcaaagtcaatcttgaagaccttgagggtcctggtagcatcaat
ggagtgccagcacttgagtttaacattgacactattgaagataaaccatggaacaaacct
ggtgctgatatctcagattatttcaattatggtttcaatgaggttacatggagtgcttat
tgtgagcgtcagaggcgaatgcgggtcaatgaagctggtgtgggcttgcatgttggaccc
actgcacctgaaatgaggagacccacaggtccagtaagacacgatgatggcccacctcca
atgcagaataattatcaatctagagaaaatacaattcaggtgatgactgccgagcgtcgt
gagtacggtcgaggcacaggagctccacccacggattacttccaaccgccagaacacttt
tatccgcctcataactatcaggagccagtgtggggtgcacccgaacagactggatgggcg
ccaactgaaataaaggagctaactcctggtcccatggctcctccggcaatggtgcctccg
ataggagttgcgcccaccatggctccgccgcatatgggcgctccgccgcacccgatggga
gcccccttttccccatataggcctccgcccatgcacgttcatgaccgtgaacgtgatcgt
gatcgtgacagagatcgagatcgtgatcgcgaccgtgaccgtgatcgcattcgggaacgt
gaagaaagggaccgtcgcgagagagatagaagagaggaggacgaaagagaacatcgggaa
agatcgcgatcaatcaaaccggataggtctcgtgaaaaatcctacagacgtgaaaggtcc
cgatcgagatcccgccgccacaaatcgaggtcacgttcaccgcgaccacgtgagcgctct
cgtgatcgtgaccgctcacgcgaccgtgaacgtagcactaaacctaagtctaaggaatct
aaggaaaaggaggacgataaatag
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