KEGG   Pieris rapae (cabbage white): 110997234
Entry
110997234         CDS       T05162                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
  KO
K12811  ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110997234
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:prap03041]
    110997234
Spliceosome [BR:prap03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110997234
 Complex B
    110997234
SSDB
Motif
Pfam: DEAD Helicase_C CdAMP_rec RSRP
Other DBs
NCBI-GeneID: 110997234
NCBI-ProteinID: XP_022120983
LinkDB
Position
2:complement(6103356..6115436)
AA seq 1006 aa
MVRSGRDRDRRRSHSRSVTPERKRRRSRSRSRDRPSKASKRKRSRSRERDTKRDRSRDRD
RERDRERDRKRDKREEKSNGSSSKSRKKSPDREKESERLKSKEESLKTESEYDIGSADKE
EEQNRLEAEMQKRRDRIERWRAERKRKELESAKKEVQKGSLVTNIQTPTVKKWSLEDDSG
DEGEEDKEAKEKQLAEEKKEEDEIDTLDAYMQEVQQEVRKVNQIDHARGIINLPSSDSSV
VILTGTAKKQVTEQKNKGELIEQNQDGLEYSSEEETEDIKDAAANLASKQRKELAKVDHS
SLQYMPFRKAFYTEISELARMTSEEVEAYRTELEGIRVKGKGCPKPIKTWAHCGISKKEM
DILKKLAFEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPPLEDTD
GPITLIMSPTRELCMQIGKDIRKFAKSLNLRVVCVYGGTGISEQIAELKRGAEIIVCTPG
RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMKIIDNIRPDRQTVMFSATFP
RQMEALARRILQKPIEVQVGGRSVVCKEVEQHVAILEEDAKFFKLLELLGLYSHLGSIIV
FVDKQENADSLLKDLMKASYSCMSLHGGIDQFDRDSTIVDFKNGKVKLLVATSVAARGLD
VKQLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAWTFLTPEQGRYAGDVLRAFELAGTN
PTPDLRNLWEKYKEAQEKDGKKVHTGGGFSGKGFKFDESEAQAATERKKYQKAALGLQDS
DDEDVEGDLDQQIETMLAAKKIVKEIKPGVAGATPPAGGPATADGKLELAKRLASRINIA
KGLGVEQKGATQQAAEAILKGSLSTHTLITAKTVAEQLAAKLNTRLNYQPRDEANAEPAE
EVFRKYETELEINDFPQQARWRVTSKEALALISEYSEAGITVRGTYVPTGKAPPEGERKL
YLAIESSQELAVAKAKSEITRLIKEELLKLQTSAHHMVNKARYKVL
NT seq 3021 nt   +upstreamnt  +downstreamnt
atggtgcgaagtggacgtgatcgtgaccgccgtaggtcacatagtcgatctgtgactcca
gaaaggaaaagacggcgttcccggtccagaagccgtgataggccatccaaagcatcaaaa
cggaagcgcagccgcagcagggagagagatacaaaacgcgatcgaagtagagatcgtgat
agggagagagacagagaaagagacaggaaaagagataaaagggaagaaaagagtaatggc
tctagtagtaaatctaggaagaaatcaccagatagagaaaaggaaagtgagaggttaaaa
tcaaaagaggaatccttaaaaactgaatctgaatatgacattggatctgctgataaggaa
gaagaacagaatagactagaggcagaaatgcaaaagcgtcgtgatcgtatagagaggtgg
cgtgctgaacgaaagcggaaggaattagaatctgccaagaaagaagttcaaaagggcagt
ttagtcaccaatatacagacaccaactgtaaaaaaatggtctttagaagatgactctggt
gatgaaggtgaagaagacaaagaggccaaagagaagcaattggcagaagaaaagaaagaa
gaggacgaaattgatacacttgatgcatacatgcaagaagttcaacaagaagttcgtaaa
gtgaatcaaatagaccatgctcgtggaatcataaatctaccatcatctgattctagtgta
gttatcctgaccgggactgccaagaagcaagtcacagaacagaaaaacaaaggagagtta
atagaacagaatcaggatggtttggagtattcatctgaagaggaaactgaggatataaaa
gatgcagccgcgaatcttgcgtcgaagcagcgtaaggagttagctaaagtggaccattca
agccttcagtacatgccatttagaaaagcattttataccgaaattagtgaattggctcga
atgacttcagaagaagtagaagcatacagaacagaattagaaggcatccgggtgaaaggc
aaaggatgtcccaaacctattaagacctgggctcactgtggtattagtaagaaagaaatg
gatattttgaagaaacttgcattcgaaaaaccaaccccaattcaggcacaggccatacca
gctattatgtccggaagagacttaattggaatagctaaaactggttcaggcaaaacccta
gcttttatattgccaatgttccgacatattttggaccaaccgcctttagaagacacagat
gggccaataacccttataatgtctcccacaagagaactttgcatgcagattggcaaagat
ataaggaaatttgcgaaatcattgaatcttcgagtcgtttgcgtttatggcggcacggga
atttctgaacagatagcggaattgaaacgtggcgctgaaataatagtgtgcactccaggg
cgtatgatcgacatgttggccgccaactcgggacgagtcacaaatctacgaagagtcacg
tacatcgtgttggatgaggctgatcggatgtttgatatgggatttgaaccgcaggttatg
aagataatagacaatattcgtccagatagacaaacggtgatgttcagcgccactttcccg
cgacaaatggaggctctagctagacggatattgcagaaacctattgaagttcaggtcggt
ggtcgcagtgtagtgtgcaaagaagtagaacaacacgtggcaatattggaagaagatgcg
aaattcttcaaacttctagaattattgggactgtacagccatttgggaagtatcatcgtg
ttcgtggataaacaagagaatgctgacagtctacttaaggatctcatgaaggcctcatat
tcttgtatgagcttgcatggaggtattgatcaattcgacagggactcgacgatcgtcgac
ttcaagaatggcaaagtgaaactcctcgtggcgacgagtgttgctgcccgaggcttggac
gtcaagcaattggttctggttgttaactacgactgtcctaatcactacgaggattacgta
catagatgcggtcgaactggtcgagctggtaacaaaggttacgcgtggacgttccttacg
ccggaacaaggaagatacgctggggatgtattgagggctttcgaactcgccggaaccaac
ccaaccccagatttgaggaacctttgggagaaatataaggaggcacaggaaaaggatgga
aagaaagttcatactggcggagggtttagtggcaaaggtttcaaatttgacgagtccgag
gcacaggcggcgacggaacgaaagaaatatcagaaagcagcactcggccttcaagattct
gatgatgaggatgttgaaggagatctcgatcagcagattgagactatgttagctgctaag
aagatagttaaggaaataaagccgggtgttgcgggtgccacgccccctgctggcggtcca
gctacggcggatggcaagctggagttggctaaacgtctggcttcaaggataaacattgct
aagggccttggcgtagagcaaaagggcgctactcaacaggccgctgaagctattttgaag
ggatcactgtctacacatacacttattaccgcaaaaacagtagcggaacagttagcggcg
aagttaaatacgcgtttgaactatcaacctcgtgacgaagcgaatgcagaacccgcggaa
gaagtattccggaaatacgaaacggagttggaaattaatgacttcccgcaacaggccagg
tggagggttactagtaaggaagcactggctcttataagcgaatattcagaggcgggtata
acagtgcgagggacctacgtacctacgggtaaagcaccaccagagggcgaaagaaaatta
tatcttgctatagaaagctctcaggagttagccgtagctaaagcgaaatctgaaataact
cggcttattaaggaagaactgctcaaactacagacgtccgcgcaccatatggttaacaaa
gctagatataaggttctataa

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