Pieris rapae (cabbage white): 111000380
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Entry
111000380 CDS
T05162
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prap03041
]
111000380
03009 Ribosome biogenesis [BR:
prap03009
]
111000380
Spliceosome [BR:
prap03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111000380
Ribosome biogenesis [BR:
prap03009
]
Eukaryotic type
Pre-60S particles
Helicases
111000380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
111000380
NCBI-ProteinID:
XP_045484308
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All DBs
Position
5:complement(191934..197006)
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AA seq
780 aa
AA seq
DB search
MEIEGHPGLIKTINDGEEVEDYSEESDVEEEYQPSKLKAKQKADFNPSFKFVASVEEYHK
DTWDDLQKYIKRNVKQTLDEKIAKRRAEVQVNGNADVDTDSEAEEQNVDELEISDDELKK
DEIKVKEKKGKKQKLKKELQEGEPQGPQIEYEDFFEDPPAYDENASFYMMNLSRPLLKAI
GTLNYVHPTPIQSATIPIGLLGKDICACAATGTGKTAAYMLPILERLLYKTVGDRITRVL
VLVPTRELGAQVHTVTRQLAQFTSVTVGLSVGGLDVKYQESVLRRNPDIVIATPGRLIDH
IKNTPSFGLHCIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSDEVKDLA
AVSLNKPVKLFLDSNKDVAFNLRQEFVRIRKERESDREAMLAALVCRTFRDRAVIFVQTK
KQAHRLHVALGLLGVKVAELHGALNQPQRLDSLKRFKDEQVDLLVATDVAARGLDIPGVK
TVINFTLPATLEHYIHRVGRTARAGRAGVSVSLAGEGERALVKAIVKRARRPVKSRQVPP
DIVAKYRDRMAKLEPEISAILNEEYAEKQLKKMEKQTEKLEGAISTKNEDGPKYETHRSR
EWFQTPKEKRMEKERLALTKHAGKDTQKGKGKKRRRDEDSDDEGPKKKKKPSKHTPKDSA
EERVKREMEKVALLQSRMAKGKKKQRRIRAVEEDDERPIQRKNAGKPRKKQSNFANDLTD
TSKTSTKRLRYDANRVQKGKPIHPGKEKQKGRGAPVKGKNKPKGKSFGKPQAPKNVRKRK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgaggggcaccccgggctcattaaaacaatcaacgatggtgaagaagttgaa
gattattcggaggaatcagacgttgaagaggaatatcaaccatcgaaactaaaagccaag
cagaaagcagattttaatccctctttcaaatttgtagcttcagttgaagaatatcataag
gacacatgggatgatttacaaaagtatattaaaagaaatgttaaacaaactcttgacgaa
aagatagctaagcggcgagcagaagtacaagttaatggcaatgctgatgttgacactgat
tcagaggcagaagaacaaaatgtagatgagctggaaatatctgatgatgaattaaaaaaa
gatgaaataaaggttaaagagaaaaagggtaaaaaacaaaaattaaaaaaggagttacaa
gaaggcgaaccccaaggtcctcaaattgaatatgaagatttctttgaagacccacctgca
tatgatgaaaatgcatcattttatatgatgaacctatcccgcccactgcttaaagctatt
ggcacattgaactatgtgcatcctacacctatccagtccgccaccatacctataggactg
ttaggcaaagacatatgcgcgtgtgctgcaacaggtactggtaaaaccgcagcatacatg
ttaccaatattagaacgactcctttacaaaactgttggtgacaggatcactagagttctg
gtattagtacctactagagaattgggagctcaggtccatacggtaacacgacaattagct
caatttacgtctgtaaccgttggtttatcagttggaggtctggatgtcaaatatcaggaa
agtgttctacgtcgcaatccggacatagtaatagcaacacccggacgacttatagaccac
ataaagaatactccatcctttggtttgcattgtatcgaagtattagttttggatgaggcg
gatagaatgctggacgagtactttgcagagcaaatgaaggagattatacgccaatgttca
cccaaacgtcaaacgatgctgttctcggctaccatgagtgacgaggtgaaggatttggct
gcagtgtccttaaacaaaccggtcaaactgttcctggattccaacaaagatgtggccttc
aatttgagacaagaatttgttagaatacgtaaggaaagggagtcagaccgtgaggcaatg
ctagcggcgttagtctgccgcactttcagagaccgagctgtgatattcgtccaaaccaag
aagcaggcgcatcgcttacacgtcgccttgggactgctaggggtcaaggtagccgaatta
cacggcgctctaaaccagccccaacgtctggattctctcaagaggtttaaagatgaacaa
gtggacctcctcgtggcgacagacgtggcggccagaggtttggacatacccggggtcaaa
actgtaattaacttcacgctgcccgctactttggagcattatattcatagggtgggacgt
acagcacgtgcgggaagagcgggcgtgtccgtgtcgttagcgggcgaaggcgaacgggca
ctcgtcaaggccatcgtgaagagagccaggcgaccggtcaagtcgcgacaggtgccgccc
gacatagtggccaaatatcgtgacagaatggccaagttggagccagagatatctgcaatt
ctcaacgaagaatatgccgagaaacagttaaagaaaatggaaaaacagacggagaagtta
gagggtgctatcagtacaaagaacgaagacggccccaagtacgaaacgcacaggagccga
gagtggttccagacgccgaaggaaaagcgaatggaaaaagagcggttggcactcaccaaa
catgctggaaaagatacacaaaaaggtaaaggcaagaagcgaaggcgagatgaagattca
gatgatgaaggtcccaagaagaagaagaaacctagcaaacacacaccaaaagattcagct
gaagaacgggtgaagagggaaatggaaaaggttgcccttttacaatcgagaatggctaaa
gggaagaagaagcaacgcagaatacgcgcagttgaagaagatgacgaaagacccatccaa
cgcaagaacgcgggaaaacccaggaaaaaacagagcaacttcgctaacgatctaacagac
acgtcaaaaacctcaacaaaacgcctacgatatgatgcaaacagggtccaaaaagggaag
cctattcatccgggaaaagaaaagcaaaagggcagaggtgcacctgttaaagggaaaaat
aaacctaaagggaagagctttggcaaaccacaagcgccaaagaacgttagaaaaagaaag
taa
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