Pieris rapae (cabbage white): 111001949
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Entry
111001949 CDS
T05162
Name
(RefSeq) probable oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111001949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
111001949
03009 Ribosome biogenesis [BR:
prap03009
]
111001949
Messenger RNA biogenesis [BR:
prap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
111001949
Ribosome biogenesis [BR:
prap03009
]
Eukaryotic type
Pre-60S particles
RNases
111001949
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
111001949
NCBI-ProteinID:
XP_022127721
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Position
9:1807425..1808810
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AA seq
219 aa
AA seq
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MDLLLKKIYPIYRNFVRTIIKRNAYQIMSGKQYINPNLDNISKRIVWVDLEMTGLDIEKD
HILEIACLVSDENLNVIATGPNIVIHQPDEILNSMNDWCISTHGESGLTKSSQESQVSVK
DAEENVLRFLKSHVPEKTCPLGGNSVYMDRIFLRKYMPTLNDYLHYRIVDVSSIKEIVKR
WYPKEYSNIPQKKFAHRGMNDILESLEELKYYKNNVFKQ
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggatttactattaaaaaagatttatcccatttatagaaactttgtacgtactataatt
aaacgcaatgcgtatcaaattatgtcgggaaaacaatatattaacccaaatttagataat
atatctaaaagaatagtatgggtagatttagaaatgactggccttgacatagaaaaagat
catatcctggagatagcatgtttagtaagtgatgaaaatctcaatgttattgctactggc
cctaacatagttattcaccagcctgatgagattctgaattctatgaatgactggtgtata
tcaacacatggtgagagtgggcttactaaatcaagccaagaatcacaagtaagtgtaaag
gatgctgaagaaaatgtattaagatttttaaaatcacatgtacctgaaaaaacatgtcct
ttaggaggcaatagtgtttatatggatagaattttcctaagaaaatatatgcctacatta
aatgactacctacattatagaatagttgatgttagctctataaaggaaatagtgaaacgt
tggtatcccaaagagtattcaaatataccacaaaaaaaatttgctcaccgtggtatgaat
gatatattggaaagtttagaagaacttaagtattataagaataatgtatttaagcagtag
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