Pandoraea pnomenusa: X636_10555
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Entry
X636_10555 CDS
T02950
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
prb
Pandoraea pnomenusa
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prb03016
]
X636_10555
Enzymes [BR:
prb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
X636_10555
Transfer RNA biogenesis [BR:
prb03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
X636_10555
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AHB75843
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All DBs
Position
complement(5378510..5379094)
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AA seq
194 aa
AA seq
DB search
MRLFLALWPGPGVRAQLHEWAVSAHAECGGRVLRAQTLHLTLAFLDEVDPARLPILLALM
QRTPLAPFTLTFDHLGFWSDRKIVWAGAAAVPDNLVATRDALLSQWGATGARVLTQAFRP
HVTLLRHARRAPSDPHPRPLLWQCDGYALVHSVRTPRGPHYRVLAEHHGTTPEGFLAAPD
ENSSMPATQYGIVG
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttttcctcgccctgtggcctgggccgggcgtacgcgcgcagcttcacgaatgg
gccgtgtcggcgcatgccgaatgcggcggacgtgtgctgcgcgcccagaccctgcatctc
acgctggcctttctcgacgaagtggatccggcccgcctgccgatccttctggcactcatg
cagcgcacaccgctcgcaccgttcacgctcaccttcgatcatctcggcttctggtcggat
cgcaagatcgtttgggccggtgcggcggccgtgccggacaatctcgtcgcgacacgcgat
gcgctgctctcgcaatggggcgccaccggggcccgcgtgctcacgcaagcattccgcccg
cacgtgacactgctgcgccatgcgcggcgcgcgccgtcggacccgcatccgcgtccgctc
ctctggcaatgcgacggctatgcgctcgttcattccgttcgcacgccgcgcgggccgcac
taccgtgtgctcgccgagcatcacggcacgacgccggaaggctttttggccgcgccggac
gagaattcgtcaatgcccgcaacgcaatacggtatagtcggatga
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