KEGG   Pradoshia sp. D12: F7984_06505
Entry
F7984_06505       CDS       T06218                                 

Definition
(GenBank) Fpg/Nei family DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
prd  Pradoshia sp. D12
Pathway
prd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:prd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    F7984_06505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prd03400]
    F7984_06505
Enzymes [BR:prd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     F7984_06505
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     F7984_06505
DNA repair and recombination proteins [BR:prd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     F7984_06505
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS zinc-ribbons_6 Ribosomal_S13 FbpA DZR Zn_Tnp_IS1595 zf-TFIIB
Other DBs
NCBI-ProteinID: QFK70921
UniProt: A0A5J6XNT3
LinkDB
Position
1318672..1319508
AA seq 278 aa
MAELPEIYQLSTQMNDSLTGKQIERVEIKQEKCCNVSGLVFSSRVIGSTVKAVQNKGKGI
IVSLSNGENMLISLGMGGDLLYFEHISSNPVQEKYQFLIQFQDGTGFSIRFWWFGKVYIA
NEQEIKEEKSIKDIAFTPFDEEFTYDYIRRLVNGKKAGIKSFLLNQKNVGGIGNMYIHDI
LFESGIHPQKKVSDLSEEEVKNLYDSMQEQLHHSLSKGSFSLEKDFYGHNGGYSTSDFQI
AYKKGEPCPRCGETIQSIKTGSTTSYFCPACQRLSKTE
NT seq 837 nt   +upstreamnt  +downstreamnt
atggcagagttacccgaaatctatcaattaagcacccagatgaatgactctctcacgggt
aaacaaattgaacgggtggaaataaagcaggaaaagtgctgcaatgtttcggggttggta
ttttcatcacgagtaataggatcaacggttaaagcggttcaaaataaagggaaagggatc
atcgtttccctatcgaatggagaaaacatgttaatttcgctcgggatgggaggagatttg
ctttactttgaacacatttcatccaatcccgttcaggaaaaatatcaattccttatccaa
tttcaagatgggacagggttttccatccgattttggtggtttggaaaagtgtatatcgcc
aatgaacaagaaatcaaagaagaaaaatcaatcaaagatattgccttcactccattcgat
gaggaatttacctatgactatatcagacggttggttaacggaaaaaaagcgggaattaaa
tccttcttgttgaatcaaaaaaacgttggcggaatcggcaatatgtatattcacgatatc
ttgtttgaaagcggaattcatcctcagaagaaagtatccgacctatcggaagaagaggtc
aaaaacctctatgacagcatgcaggaacaattgcaccattctttatccaaggggagtttt
tctcttgaaaaggatttttatggacacaacggtgggtactcgacgagtgattttcagata
gcgtataaaaaaggggaaccttgccctagatgcggggagaccattcaatcgatcaaaaca
ggaagcaccacctcgtacttttgtcctgcgtgtcagaggttgtcaaagacggaatga

KEGG   Pradoshia sp. D12: F7984_15120
Entry
F7984_15120       CDS       T06218                                 

Gene name
mutM
Definition
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
prd  Pradoshia sp. D12
Pathway
prd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:prd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    F7984_15120 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prd03400]
    F7984_15120 (mutM)
Enzymes [BR:prd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     F7984_15120 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     F7984_15120 (mutM)
DNA repair and recombination proteins [BR:prd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     F7984_15120 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS FbpA
Other DBs
NCBI-ProteinID: QFK72480
UniProt: A0A5J6XS71
LinkDB
Position
complement(3148412..3149242)
AA seq 276 aa
MPELPEVETIRRTLEVLVLGKTIDDVDIRWAKIIKEPDDAELFRMLLKGQTIHEIGRRGK
FLIFHLDDYSLVSHLRMEGKYGLYDETEPADKHTHVIFKFTDQTELRYRDVRKFGTMHLH
TKGTELEVLPLSKVGPEPFSDEFTPDYLSTALSKTNRFIKTVLLDQRVVAGLGNIYVDEA
LFHSGIHPERPASTLTKEEIEKLYTSIKETLATAIEKGGSTVRSYVNSQGQIGMFQLELF
AYSRKGQPCKICGTNMERIIVGGRGTIYCPECQPLA
NT seq 831 nt   +upstreamnt  +downstreamnt
atgcctgaattacctgaggtcgaaacaatcagaaggaccctcgaagttttggtacttgga
aaaacaattgatgatgtggatatacgctgggcaaaaattataaaagagccggatgatgct
gaactgtttcgtatgcttttaaaagggcaaaccattcatgagattgggaggcgaggtaaa
ttcctgattttccatttagatgattacagtcttgtttcccatttacggatggaagggaaa
tacggtctttatgatgaaacggaaccggcagataagcatacgcatgttatattcaaattt
acggatcaaacggaattgagatacagagatgtccgtaagtttggcacgatgcatctgcat
acaaaggggacagaattggaagtattgccactttcaaaagtaggacctgagcctttttca
gatgaatttacaccagattacttaagcacagcactcagtaagacaaatcgttttataaaa
acggtattattggatcaaagagtagttgcaggtcttggtaatatctatgtggatgaagca
ttgttccattccggtatccatcctgaacggccggcatccacattgacaaaagaggaaata
gaaaaactatatacatccattaaggaaactcttgctaccgccattgaaaaaggtggaagt
acagtacgatcctatgtgaattcacagggccaaatcggcatgtttcagctcgagctgttt
gcatattcgagaaaaggacagccttgtaaaatttgcggaacaaacatggaaagaattatt
gttggaggcagagggaccatctactgtcctgaatgtcagccattagcctaa

DBGET integrated database retrieval system