KEGG   Pradoshia sp. D12: F7984_14230
Entry
F7984_14230       CDS       T06218                                 

Gene name
recJ
Definition
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
prd  Pradoshia sp. D12
Pathway
prd03410  Base excision repair
prd03430  Mismatch repair
prd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:prd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    F7984_14230 (recJ)
   03430 Mismatch repair
    F7984_14230 (recJ)
   03440 Homologous recombination
    F7984_14230 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prd03400]
    F7984_14230 (recJ)
Enzymes [BR:prd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.-  Acting on ester bonds
    3.1.-.-  
     F7984_14230 (recJ)
DNA repair and recombination proteins [BR:prd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     F7984_14230 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     F7984_14230 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      F7984_14230 (recJ)
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHHA1 DHH
Other DBs
NCBI-ProteinID: QFK72316
UniProt: A0A5J6XRH0
LinkDB
Position
complement(2963565..2965934)
AA seq 789 aa
MLQSKTRWLLKKADETIINLFMQELEQPRIVATLLVNRGIKTVEEARSFLYAAQQDFYDP
FLLSGMEEAMRRIVKAVKNNEKITIFGDYDADGVSSTTILMLTLKIMGAEHVSWYIPNRF
TEGYGPNEEAFRFIKEQGTTLLITVDCGISAIHEAQVAKELGMDYIVTDHHEPGPELPQA
LAILHPKKPGETYPFSELAGAGVAMKLAHALLGELPDELIGIAAIGTVADLVPLHDENRL
IAIKGIQALKKSTRPGILALCQKAGIQRDSLNEDSIGFGLAPRINAVGRLESADPAVELL
LTESQEEADSIADEIDLLNKERQSIVKEMTQEAIEEVENNYPPETNPVLIIAREGWNTGV
VGIVASKLVEKYYRPTIVLSIDREKGTAKGSARSIPGFDLFQNLSLNRELLPHFGGHPMA
AGMTLKIEDVEELRQRLINQANEILTEEDFQPVTEIDSLVAIDEISLTLIQQMSQLAPYG
MQNPKPRILIEDASITTSRKIGADKTHLKLQLEQNDAGLDSIGFGLGEFLDHLSPQAKVS
VIGELAINEWNNIKKPQLFLQDLSVPGWQLFDCRSDKGKIHVQTVPSPRKIILFQEESRV
WLTEFTKENDQIIHITSLEAAQQETLDGYHVVLADLPSQKDIFEALFIGKLPKRVYVYFR
TTQNDYFSAFPTRDQFKWYYALLAKKGPISYKELRSMLNIHKGWSKENIDFMTKVFFELE
FVTINNGLIDLVRTSMKRDLQESKTYQERQARMALEQELLYASFNQLYEYLGKLIRSHME
NKEETEQWI
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgttacaatcaaaaacacgttggcttttaaaaaaagctgatgaaaccattataaatcta
ttcatgcaagaacttgaacagcctcgtattgtggctacattattggtcaacagaggaata
aagaccgtagaagaagcgcggtcttttttgtatgcagcccagcaggatttctatgatccg
tttttactatcaggtatggaagaagctatgagacggattgtgaaagctgtaaaaaacaac
gaaaagattactatattcggagactatgatgccgatggggtcagcagtacgaccatctta
atgctcacgcttaaaataatgggagcagaacatgtgtcatggtatattccaaatcgcttt
acagaaggctatggcccaaatgaagaggcttttcgattcataaaagaacagggaactacg
ttacttatcacagtagactgtggcatttcggccattcatgaggctcaagtggcgaaagaa
ttgggaatggattatattgtgacggaccatcatgaaccgggtcctgagttaccgcaggca
ttagctatccttcatcccaaaaagccgggtgaaacttatccgttttcagagttggcaggt
gcaggtgtggcaatgaaattggcccatgctttacttggtgagttgcctgatgagttgatt
ggcattgctgcaattggaacagtagctgacttggttcctcttcatgatgaaaatagatta
attgcgattaaagggattcaggcattaaagaaatcaacgagaccgggaatccttgccctt
tgtcaaaaagcaggtattcagcgcgattccttaaatgaggattccattggatttggattg
gcaccgagaataaatgctgtaggaagattggaatcggcagatccagctgtagagctttta
cttacagaaagtcaggaagaagctgattcgatagccgacgaaatagatttattgaataaa
gagcggcaatcaatcgtaaaagaaatgacccaggaagcgattgaggaagtggagaataac
tatccacctgaaaccaatccggtcctaattattgcccgtgaaggatggaatactggtgta
gtagggattgtagccagtaagcttgtagaaaagtattatcgtccgacgatcgtattaagt
attgatcgtgagaaaggaacagcaaagggatctgcacgcagtattccaggatttgatctt
tttcaaaacttatctttaaacagagaactgcttcctcattttgggggccatcctatggct
gctggtatgacattgaaaatagaagatgttgaggaattgagacaacgattgatcaatcag
gctaatgaaattctaacagaagaagatttccagcctgttactgagatagatagcttagtt
gcgattgatgaaatttcattaacgcttattcagcaaatgtcccagcttgcaccgtacggg
atgcaaaacccaaaaccgaggattttgattgaggatgcctcaataacaacttccaggaaa
attggggcagataaaactcatcttaaacttcagctcgaacaaaatgacgctgggttagat
agcattgggtttggattaggagagttccttgatcatttatctccgcaggccaaggtatct
gtaattggggaattggcgataaatgaatggaataatataaaaaagccccaattgttttta
caggatctttctgtaccagggtggcagttatttgattgtcgcagcgataaggggaaaata
catgttcagacagtgccgtctccacgcaaaatcatcttatttcaggaagagagtagggtg
tggctgacggaatttactaaagagaatgatcaaattatccatattacctctttagaagca
gctcaacaggaaactttagacggctatcatgtagttttagcagatttaccttcacaaaaa
gatatatttgaagcactttttattggaaaattgcctaaaagagtgtatgtttactttcgt
accactcaaaatgattatttctcagcgtttccaacaagagaccaatttaaatggtattat
gccttgttggcaaaaaaaggacctatttcatataaagaactgcgttccatgctgaatatt
cataaaggctggtcaaaagaaaatattgattttatgacaaaggtgttttttgagctcgag
tttgttacaataaataacggactcattgatttggtaaggaccagtatgaaacgggatctc
caagaatctaaaacctatcaagaaagacaagcaagaatggcgttggaacaagagcttcta
tacgcttcattcaatcagctttatgaataccttggcaagttgattcgatcccacatggaa
aacaaggaggaaactgagcaatggatttaa

DBGET integrated database retrieval system