KEGG   Pradoshia sp. D12: F7984_15120Help
Entry
F7984_15120       CDS       T06218                                 

Gene name
mutM
Definition
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
prd  Pradoshia sp. D12
Pathway
prd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:prd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    F7984_15120 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prd03400]
    F7984_15120 (mutM)
Enzymes [BR:prd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     F7984_15120 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     F7984_15120 (mutM)
DNA repair and recombination proteins [BR:prd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     F7984_15120 (mutM)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS FbpA
Motif
Other DBs
NCBI-ProteinID: QFK72480
UniProt: A0A5J6XS71
LinkDB All DBs
Position
complement(3148412..3149242)
Genome map
AA seq 276 aa AA seqDB search
MPELPEVETIRRTLEVLVLGKTIDDVDIRWAKIIKEPDDAELFRMLLKGQTIHEIGRRGK
FLIFHLDDYSLVSHLRMEGKYGLYDETEPADKHTHVIFKFTDQTELRYRDVRKFGTMHLH
TKGTELEVLPLSKVGPEPFSDEFTPDYLSTALSKTNRFIKTVLLDQRVVAGLGNIYVDEA
LFHSGIHPERPASTLTKEEIEKLYTSIKETLATAIEKGGSTVRSYVNSQGQIGMFQLELF
AYSRKGQPCKICGTNMERIIVGGRGTIYCPECQPLA
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacctgaggtcgaaacaatcagaaggaccctcgaagttttggtacttgga
aaaacaattgatgatgtggatatacgctgggcaaaaattataaaagagccggatgatgct
gaactgtttcgtatgcttttaaaagggcaaaccattcatgagattgggaggcgaggtaaa
ttcctgattttccatttagatgattacagtcttgtttcccatttacggatggaagggaaa
tacggtctttatgatgaaacggaaccggcagataagcatacgcatgttatattcaaattt
acggatcaaacggaattgagatacagagatgtccgtaagtttggcacgatgcatctgcat
acaaaggggacagaattggaagtattgccactttcaaaagtaggacctgagcctttttca
gatgaatttacaccagattacttaagcacagcactcagtaagacaaatcgttttataaaa
acggtattattggatcaaagagtagttgcaggtcttggtaatatctatgtggatgaagca
ttgttccattccggtatccatcctgaacggccggcatccacattgacaaaagaggaaata
gaaaaactatatacatccattaaggaaactcttgctaccgccattgaaaaaggtggaagt
acagtacgatcctatgtgaattcacagggccaaatcggcatgtttcagctcgagctgttt
gcatattcgagaaaaggacagccttgtaaaatttgcggaacaaacatggaaagaattatt
gttggaggcagagggaccatctactgtcctgaatgtcagccattagcctaa

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