KEGG   Pradoshia sp. D12: F7984_15200
Entry
F7984_15200       CDS       T06218                                 

Gene name
dnaE
Definition
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
prd  Pradoshia sp. D12
Pathway
prd03030  DNA replication
prd03430  Mismatch repair
prd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:prd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    F7984_15200 (dnaE)
   03430 Mismatch repair
    F7984_15200 (dnaE)
   03440 Homologous recombination
    F7984_15200 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:prd03032]
    F7984_15200 (dnaE)
   03400 DNA repair and recombination proteins [BR:prd03400]
    F7984_15200 (dnaE)
Enzymes [BR:prd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     F7984_15200 (dnaE)
DNA replication proteins [BR:prd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     F7984_15200 (dnaE)
DNA repair and recombination proteins [BR:prd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     F7984_15200 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DUF4539
Other DBs
NCBI-ProteinID: QFK72496
UniProt: A0A5J6XRY2
LinkDB
Position
complement(3168245..3171601)
AA seq 1118 aa
MSLIHLHVYSAYSLLESTLSIRDIVTSAKNNGFSSIALTDRNVMYGAVSFYKECMEQGIK
PIIGLTADIFDDEEHKSYPLILLAKNNEGYHNLMKISSAIQTKSPDGLPFRWLKGYARGL
IAITPGIEGEIESTLFHNEQAAEKVLLKYKTLFGNQSFYLSLPKPSTEGMERAKIKQLAD
KTNTQLVAAHHICYLKPEDSLAYQALTCLKDNIKIEELDKIELSENERKHFASRSEMMEW
YSSDVAALENTIQIAKECCVNLEFNQKLLPKYPVPNDLSAHQYLIEICKKGFAKRYPTPD
KKHFERLEYELTVIADMGFSDYFLIVWDFMNHANKQGILTGPGRGSAAGSMVAYVLGITN
VDPIEYNLLFERFLNPERITMPDIDIDFPDNRREEMIRYVAKKYGPIHVAQIITFGTFGA
KAALRDAGRVCGLNTKELDQLSRSLPPINGLTIQLAHSESSRFRTWIAESALHKRIFEIA
KKWEGLPRHTSIHAAGVIITDQPLTDLIPIQEGHEGVYLTQFPMEILEEIGLLKMDFLGL
RNLTLLDQIVRQVNRSSGKKIQLSQIPLDDTATFELLSKGLTSGIFQFESAGMQNVLKKL
KPTVFEDLVAVNALYRPGPMDNIPTFINRKHGIEPITFPITELETILKPTYGIIVYQEQI
IQIASTMAGFSLGEADLLRRAVSKKKKDVLDEQRAHFVKGAMARGHEQHTANEVYDLIVR
FANYGFNRSHAVAYSLIAYQLAYLKANYLRSFMAGLMTSVIGNDDKIAQYVQELKSKDYI
VYPPSINKSHFPFILEGDKGVRYSLAAVKGIGASVLKELVAARKNGPFEDLFDVCIRIPS
RIINRKVLENLCYAGAFDEFKMDRASILASIDVALEHAELVRPDSGEVGFFDADDMFIKP
KYVVVDPMPTDKKLQKEKEVLGLYLSDHPISGSRPLLKHAGALPLSNFPLNSTGFVGAYI
QSVKLIRTKKGENMAFLLLSDETGDMEGVTFPNVYKQYSSILKEGNLVLIEGKLEERNGK
KQFITQNLYDLENDIPKIKELFKSVYIKVAPNVQTNKTLTAIRNVLIQYRGNTKVYIYYE
KDTKTIQLSKENWVNPTPALLKDLERIIGEGNVLIKED
NT seq 3357 nt   +upstreamnt  +downstreamnt
atgtcattaatccatcttcatgtatatagcgcgtatagtcttctggagagtacgttatca
atcagggatatcgttacctcggcaaagaataatggtttcagcagtatcgcattaacagat
cgaaatgttatgtatggggctgtgtctttttacaaggaatgcatggaacagggaatcaag
ccaatcataggtttgactgcagatatatttgatgatgaagagcataaaagttatcctctt
attttgctggctaaaaataatgaaggatatcataacctaatgaagatatcgagtgcaatt
caaacgaagtctcctgatggtttgccattcagatggttgaaaggatatgcaagaggcctc
attgccattacaccgggaatagaaggtgaaattgaaagtacacttttccacaatgagcaa
gctgcagaaaaagtcctcttgaaatataaaaccttgtttggtaatcaatctttttatctt
tcattgcctaaaccgtctacggaaggaatggagagggcgaagatcaaacaactggctgac
aaaacgaacacccagcttgttgcagctcaccatatttgttatttgaagccagaagattca
ctggcttatcaagcattgacttgtttaaaagataatataaagatagaagaattggataaa
atcgagttgtctgagaatgaaaggaagcattttgcgagccgttctgaaatgatggagtgg
tactcatccgatgtggctgctcttgaaaatacgattcaaatagccaaagaatgctgtgta
aacttagagtttaatcaaaaattacttccaaagtatcccgttcctaatgatttgtccgca
catcaatatttgatagagatttgcaaaaaaggatttgccaagcgttatccaactcccgat
aaaaagcactttgaacgattggaatatgaattaactgtaattgctgatatggggttcagt
gactatttcctgattgtctgggactttatgaatcatgctaataaacaagggatattaaca
ggtcctggacgtggatctgctgcaggttcgatggttgcttatgtgcttggaattaccaat
gtcgatcctattgaatacaatctattgtttgaaaggtttctgaatccggaaaggattacg
atgcctgatatagatatcgactttccagacaatcgcagagaagaaatgatacggtacgta
gcaaagaaatatggacccattcatgtggcacaaattataacctttggtacatttggagca
aaggccgctttgcgggatgcgggcagagtttgtggattgaacacgaaggagttggaccag
ctatctcgttcgcttcctcctattaacggactgaccatacaattggcgcattctgaatcc
agccgtttccgtacatggattgcagaatctgcacttcataagcggatttttgaaatcgcc
aagaagtgggaagggcttccaagacatacatccatacatgccgcaggggtaattattacc
gatcaaccgctgaccgatttaattccgattcaggaagggcatgagggtgtttatttgacc
cagttcccgatggaaattttagaagaaattggtcttttgaaaatggattttctcggactc
cgaaatttaactttgcttgatcagattgtgagacaggtaaatcgttcatcgggtaagaag
attcagttaagtcagattccattggatgacacggccacatttgagttattaagtaaggga
ctaacatcagggatttttcagtttgaatcagctggcatgcaaaatgtccttaaaaagcta
aaacccactgtttttgaggatttggtagcggtcaatgccctgtataggccgggccctatg
gataatatcccgacattcataaatcgtaaacatggaattgaacctattacttttcctatt
actgaattggaaacaattctgaagcctacctacgggatcattgtgtatcaggaacaaata
atccagattgcttcgacaatggccggtttcagcttaggagaagctgatttgctgagaaga
gctgtaagtaagaagaaaaaagacgttctcgatgaacaaagagctcattttgtaaaaggg
gctatggctagagggcacgaacagcatacggcaaatgaagtatatgacttaatcgtccgg
ttcgcaaattatgggtttaataggagtcatgcagtcgcttacagcctaattgcatatcag
ttagcctatttaaaggcaaattatttgcgcagctttatggcagggttgatgacatctgta
attggaaacgatgataaaatagctcaatacgttcaggaattaaagtcaaaagattatata
gtctatccgccatcaatcaataaaagtcatttcccgtttattcttgaaggagataaaggg
gtgcgttacagtctggcagctgtgaagggcattggagcttccgtcttaaaagaactggtt
gcagctcgtaaaaatggcccatttgaagatctatttgatgtttgtatacgtattccttcc
cgtatcataaacagaaaagtattggaaaatttatgttacgcgggtgcatttgacgagttt
aaaatggatcgtgcaagtattttggcaagcatagatgtggcactggagcatgctgaattg
gttcgtcctgattcaggagaagttggtttttttgatgctgatgatatgttcattaaaccg
aaatatgtagtagtcgacccgatgccaacggacaaaaagttacaaaaagaaaaagaagtt
ctcggcttatatttatccgaccacccaatcagcggttcaagacctttattaaaacatgca
ggagcacttcctctgtccaattttccactgaattcaacaggatttgttggtgcttatatt
caatctgttaaactgatccgtacaaagaaaggcgaaaatatggcttttctgcttctaagt
gatgaaacgggtgatatggaaggggttacttttccaaatgtgtacaagcaatattcatcc
attttaaaagaaggaaatttagttttaatagaaggaaagctggaggagcgcaatgggaag
aaacaatttatcacacaaaatctttatgatttagagaatgatataccgaaaataaaggaa
ctttttaaatccgtctatattaaggttgctccaaatgttcaaaccaataaaaccttaaca
gctattcgtaatgttttgattcaatatcgtgggaacacaaaggtgtatatatattacgaa
aaagatacaaaaactattcaattatccaaggaaaactgggtgaaccctactcccgcccta
ctgaaagatttagaaagaattataggagaaggaaatgtcctgattaaagaagattaa

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