Pseudomonas resinovorans: PCA10_03550
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Entry
PCA10_03550 CDS
T02708
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
3.6.4.13
]
Organism
pre
Pseudomonas resinovorans
Pathway
pre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCA10_03550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pre03019
]
PCA10_03550
Messenger RNA biogenesis [BR:
pre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PCA10_03550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BAN46087
UniProt:
S6AC37
LinkDB
All DBs
Position
complement(382388..384373)
Genome browser
AA seq
661 aa
AA seq
DB search
MSFASLGLSEALVGAVEAAGYAQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTAGFALPVL
ELLFPNGHRDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLGLISTCIFGGVGMN
PQVQALAKGVDLLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFIHDVKKVLAR
LPAKRQNLLFSATFSKDIVDLANKLLHDPERIEVTPPNTTVERIEQRVFHLPASHKRALL
AHLITVGAWEQVLVFTRTKHGANRLAEYLTKHGLAAAAIHGNKSQNARTKALADFKANDV
RILVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAISLVAPDEEKL
LKAIERLTKQRIPDGDTQGFDPATVEAERPEARPPRPERQPRADKPKRESRAAAPQASGE
AKEAREPAAEGAEDKPRKSRNRRRGKGKGTGQEGQQGQQGQQGQQAGGPRQSQQPQQPKQ
PKQARPPQPAPDRDPEEFLDDDVDNFGNRADYVSPYPPKGQGRNQRRGGQGQGQSQGQGQ
RQQGQGQPSQGRSGGGEKGRGQGGNGQGRQGGQGGQKQGQQRQGKPSAKGRGNGQRREDQ
LVSRGRDEPAVQDPRASNKPAPKIIMKESRTDRYPTPEQLDELQQSNRPRGEKPALLTRN
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgcttccctcggtctctccgaggcattggtcggcgccgtcgaagctgccggc
tacgcccagcccactcccgtgcaacagcgggcgattcccgccgtgttgcaaggtcgcgac
ctgatggttgcggcccagaccggtaccggcaagaccgccggtttcgccttgcccgttctg
gaactgctgttccccaacggccatcgcgacaagtcccagcgccatggcccacgccagccg
cgggtactggtcctgactccgacccgcgaactggcggcccaggtacacgacagcttcaag
ctctacgcccgtgacctcggcctcatcagcacctgcatcttcggtggggtcggcatgaat
ccccaggtccaggcccttgccaagggcgtggacctgctggtggcctgccccggccgcctg
ctcgacctggccggccagggtagcgtcgacctctcccacgtggagatcctggtactcgac
gaagccgaccggatgctcgacatgggcttcattcacgatgtgaagaaggtcctcgcccga
ctcccggccaagcgccagaacctgctgttctcggcgaccttctcgaaagacatcgtcgac
ctcgccaacaagctgctgcacgatcccgaacgcatcgaagtgacgccgccgaacaccacg
gtcgagcgtatcgaacagcgcgtgttccacctcccggccagccacaagcgggccctgctg
gcgcacctgatcaccgtcggtgcctgggaacaggtgctggtcttcacccggaccaagcac
ggcgccaaccgcctggccgagtacctgaccaagcacggcctggccgccgccgcgattcac
ggcaacaagagccagaacgcgcgcaccaaggccctggcggacttcaaggccaacgacgta
cgcatcctggtggccaccgacatcgccgcccgcggcctggacatcgaccagttgccccac
gtggtcaacttcgagctgcccaacgtcgaggaagactacgtacaccgcatcggccgtacc
ggtcgtgccggtcgtagcggtgaagccatctccctggtggcgccggacgaagagaagctg
ctcaaggccatcgagcgcctgaccaagcaacgcatcccggacggtgatacccagggcttc
gacccggccaccgtcgaggccgagcgtcccgaggcgcgtccgccgcgtccggagcgccag
ccccgcgccgacaagcccaagcgcgaatccagggccgccgcgccccaggcctctggcgaa
gccaaggaagcccgggaacccgctgccgaaggcgccgaagacaaaccgcgcaagagccgc
aatcgccgccgtggcaagggcaaaggcacgggccaggaaggccaacagggccaacagggc
caacagggccagcaagccggtggcccgcgccagtcgcagcaaccgcaacagcccaagcaa
ccgaaacaggcccgcccgccgcaaccagcgccagatcgggaccctgaagagttcctcgat
gacgacgtggacaacttcggcaatcgcgctgactacgtcagcccctacccgcccaagggc
cagggccgcaatcagcggcgcggtggccagggccagggtcagtcccaaggtcagggtcag
cgtcagcaaggccagggccaaccgagccagggccgcagcggcggtggcgagaaaggccgc
ggccagggtggcaacggccaaggtcgtcagggtggccagggcggtcagaagcagggccaa
cagcgccagggcaaaccgtcggccaagggccgtggcaatggccagcgccgtgaagaccag
ctggtttcccgtggccgcgacgagcctgcggtgcaagatccgcgcgccagcaacaagccg
gcgccgaagatcatcatgaaagagtcccgcaccgaccgttacccgacgccggagcagttg
gacgagctgcaacagagcaaccgcccgcgcggcgagaaaccggcattgctgacccgcaat
cgctga
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