Pseudomonas resinovorans: PCA10_08470
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Entry
PCA10_08470 CDS
T02708
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pre
Pseudomonas resinovorans
Pathway
pre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCA10_08470 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pre03019
]
PCA10_08470 (rhlE)
Enzymes [BR:
pre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PCA10_08470 (rhlE)
Messenger RNA biogenesis [BR:
pre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PCA10_08470 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BAN46579
UniProt:
S6BC09
LinkDB
All DBs
Position
900807..902129
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AA seq
440 aa
AA seq
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MTFASLGLIEPLLRATEALGYKTPSPVQAEAIPAVLKGRDLMAAAQTGTGKTAGFALPLL
QKLTQEGPEVASNSVRALVLVPTRELAEQVNESFRVYGQHLPLRNYAVYGGVSINPQMMK
LRKGIDVLVATPGRLLDLYRQNAVKFNQLQVLVLDEADRMLDLGFSRELDDVFTALPKRR
QTLLFSATFSDAIRQMARELLRDPLSIEVSPRNAAAKSVKQWLITVDKKRKAELFLHLLQ
ERRWGQVLVFAKTRKGVDELVDELQGQGVSADAIHGDKPQPSRLRALERFKAGEVQILVA
TDVAARGLDIDDLPLVVNFDLPIVAEDYVHRIGRTGRAGATGEAISLVCADEVQLLSAIE
VLIKQTLQRRDEPGFVPDHRVPQTDATGAILKKPKKPKKPKEQAAGKDGKGAALGRWIDS
EKPKVKAVRKGPGFGKVKKG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcgcttccctcggcctgatcgaacccctgctgcgcgccaccgaggcgctcggc
tacaagaccccatcgccggtacaggccgaggcgattcctgccgtcctcaagggccgcgac
ctgatggccgccgcccagaccggcaccggcaagaccgcgggcttcgccctgccgctcttg
cagaaactgacccaggaaggcccggaagtggccagcaactcggtgcgcgcgctggtgctg
gtgcccacccgcgagctggccgagcaggtcaacgaaagtttccgcgtctatggccagcac
ctcccgctgcgcaactacgcggtctacggcggcgtgagcatcaacccgcagatgatgaag
ctgcgcaagggcatcgacgtcctggtcgccacgcccgggcggctgctggacctctaccgg
cagaacgcggtgaagttcaaccagctccaggtgctggtgctggacgaggccgaccgcatg
ctcgacctcggcttctcccgcgagctggacgacgttttcaccgcgctgcccaagcgccgc
cagaccctgctgttctccgccaccttctccgacgccatccgccagatggcccgcgagctg
ctgcgcgacccgctgtccatcgaagtgagcccgcgcaacgcggcggccaagagcgtcaag
cagtggctgatcaccgtggacaagaagcgcaaggccgagctgttcctgcacctgttgcag
gagcgtcgctggggccaggtgctggtgttcgccaagacccgcaagggcgtcgacgaactg
gtggacgagctgcagggccagggcgtctccgccgacgcgatccacggcgacaagccccag
ccctcgcggctgcgcgcgctggagcggttcaaggctggcgaggtgcagatcctggtggcc
accgacgtggccgcccgtggcctggatatcgacgacctgccgctggtggtcaacttcgac
ctgcccatcgtcgccgaggactacgtgcaccgcatcggccgcaccgggcgagcgggcgcc
accggtgaagccatttcgctggtctgtgccgacgaggtacagctgctgtcggccatcgag
gtattgatcaagcagaccctgcagcggcgcgatgagcccggtttcgttccggaccaccgg
gtgccgcagaccgatgccaccggggccatcctgaaaaagccgaagaaaccgaaaaagccc
aaggagcaggccgccggcaaggacggcaagggcgcggcgctggggcgctggatcgacagc
gagaagcccaaggtcaaggcggtgcgcaaggggccggggtttgggaaggtgaagaagggc
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