Poecilia reticulata (guppy): 103461699
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Entry
103461699 CDS
T05149
Symbol
ifih1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04622
RIG-I-like receptor signaling pathway
pret05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103461699 (ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103461699 (ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pret04054
]
103461699 (ifih1)
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103461699 (ifih1)
Pattern recognition receptors [BR:
pret04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
103461699 (ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
DEAD
ResIII
Helicase_C
SWI2_SNF2
Ric8
UPF0167
C1_4
Motif
Other DBs
NCBI-GeneID:
103461699
NCBI-ProteinID:
XP_008402244
UniProt:
A0A3P9NPK7
LinkDB
All DBs
Position
LG2:32202896..32219409
Genome browser
AA seq
969 aa
AA seq
DB search
MASDNDEILERRIECLKPRLRQLIKVDQVLQHLHLESGRTEEIRQKLNTEGNESAVNLLI
NVIVEKPHSVGWFRAFVDALIHGGSAHAADYLELNLPDPEVEAENDYYIELIRLFTPSLE
KMKTEEVLTHCQRFLTAADQEKIEAEKTNHGNIHGAQELLRRIVKCRPGWFSEFREILRA
TEHKDLYELIGGSPECKKPKNEAAAEEKPAESCQSEEPMEISGTEGSQNDAADLYLDGDL
SKSMDNLPPDVNGCPAAEAAGATGGDPEEIXLRDYQMEVARPALKGENVIICLPTGSGKT
RVAVYITQKHLDSRRAERKPGKVVVLVNKIPLVEQHFSTEFSILKPKYKVERVSGDSQLK
ISFANIVERNDIIICTAQILENYLERASSGEDEGVKLSDLTLIIIDECHHTQKGEVYNHI
MMRYLKQKHKNKKLLKEQKNPVPLPQILGLTASPGVGGAKTLNKAEEHILRICANLDASK
IMTGSIEKKEQRKSILPVESRKEDPFGCVVKTIMTAIHEHARLFPTCDLGSQNYEQWAVQ
KEREAAKDGDQTVRVCAEYLRRYNEGLILSNTIRMCDALSFLNKFHEEQIKKKTSPDEEQ
NMQITETERFLFNLFKDKKEELEKLAKDPTYENDSLSKLRTKILQEFSSRKEARGIIFTK
TRHSAMTLSQWIQENPKFADIDVKPSYFIGGGDQSDTKPMTAAEQKDVLKRFKTGELNLL
IATTVAEEGLDITACNFVIRYGHVTNEIAMIQSQGRGRAEDSTYTVVDVKNSGVAEKEYV
NEYREQMMNKAIQKIKKLDQSVYNKQITEFQIQAIMEERVRQVNQKKKAVKDEDPSAVKF
SCRHCTKYICSGEDIQIIENMHRVNVTQQFRRLFIQRENVSLQERRLDYETNGVIACSGC
GQTWGSMMFYRGIELPCLHVKNFVVDIKKKKYSNCTRWNDLPVKFPDFDYIEHASLLAQG
SDDEDTEWP
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgataatgatgagatacttgaacgtcgcattgaatgtttaaaaccgagactc
cggcagcttataaaggtagaccaggtactacaacatttacatttagaatctggacgaacg
gaggagatcagacagaaactgaacacggagggtaatgaatcggctgtgaatttgcttatt
aatgtgattgttgagaagccacattcagtcggctggttcagggccttcgttgatgcgttg
attcatggaggcagcgctcacgctgctgactatttggagttaaacctcccagaccccgaa
gtggaggcggaaaatgattactatatcgagctaattcggttatttactcccagtctggag
aaaatgaaaacagaagaagtgttgactcactgtcaacgtttcctaactgctgcggaccaa
gagaagattgaggctgaaaaaacaaaccacggaaacatacatggagcccaggaacttctg
agaaggattgtgaaatgccgccctggctggttctctgaatttcgggaaattctgcgtgcc
actgaacacaaagacctttatgagctcattggaggatcacctgagtgtaagaaaccgaaa
aatgaagcagcagcagaggagaaaccggccgaaagctgtcagagtgaggagcccatggaa
atcagtggcaccgagggatctcagaatgatgccgcagatctgtatttagacggtgacctt
tccaaatccatggacaatttacctccagatgtaaatggctgtccagcagcagaagcagca
ggagccaccggaggagacccagaagaaatttmtcttcgtgattatcagatggaagttgcc
aggcctgccttgaagggggaaaacgttattatttgcctcccgacaggaagcggtaaaacc
agagttgcagtgtacattacccaaaaacatctggacagcaggagagctgagaggaaacca
gggaaggtggttgtcctggtgaacaagattcctcttgtggagcagcatttctccacagag
ttctctatcctgaagcccaagtacaaagtggagagggtcagtggagactctcagctcaaa
atctccttcgctaacattgtagaaagaaacgacatcatcatctgcacagcccagattctc
gaaaattacttggagagggcttccagcggagaggatgaaggggtgaagctaagcgatctg
acactgatcatcatagatgagtgtcaccacactcagaaaggagaagtctacaaccacatc
atgatgaggtacctgaaacaaaagcacaaaaacaaaaagctcctgaaggagcagaagaat
cccgtaccgcttcctcagatcctgggcctgacggcctcaccgggggtcggaggtgccaaa
accctgaataaagctgaagagcacattctgcgaatttgtgcaaacttggatgcttccaaa
attatgacaggaagcattgagaaaaaggaacaacgaaaatccatcctgcctgttgaatcg
agaaaagaggatccctttggttgtgtggtcaagacaatcatgactgccattcacgagcat
gcccggcttttccccacatgtgacctgggctctcagaattacgaacaatgggctgttcaa
aaagagcgagaagctgccaaagatggagaccagacagtgcgggtctgcgcagagtacctc
cgacggtacaatgaaggtctgattttaagcaacaccatacgcatgtgtgatgctctcagt
ttcctgaacaagttccacgaggagcagatcaagaagaaaacatcaccagatgaagaacaa
aacatgcaaataacggagacagagagatttttgttcaatttgtttaaagacaaaaaggaa
gagctggagaagctggcaaaggatccaacatacgaaaacgacagcctgtcaaaactcaga
actaaaattttacaagagttcagcagccgaaaagaagccagagggatcattttcaccaaa
acacgtcacagcgctatgactcttagccagtggattcaagaaaaccccaagtttgctgac
atcgacgtaaaaccttcttatttcattggagggggagaccagagcgataccaaaccaatg
acagctgcagagcagaaggatgtgttgaaaaggttcaaaaccggtgaactcaacctcctt
attgctaccacagtggcagaagaaggtttggacataacggcctgcaattttgttatccga
tatggccatgtgaccaatgaaatcgctatgattcagtctcaaggcagaggaagagctgag
gacagtacatacactgtggtggacgtaaagaactcaggggtggctgaaaaggagtatgtc
aacgagtaccgtgagcaaatgatgaacaaagccattcagaaaattaaaaagttagatcaa
tcagtttacaacaaacaaatcacagagtttcagattcaggctataatggaggaaagagtg
agacaggtaaatcagaagaagaaggctgttaaggatgaggacccgtctgctgtaaagttt
agctgccgtcactgcaccaaatacatctgcagcggcgaagacatccaaatcattgaaaac
atgcacagagtcaatgttacgcaacagtttaggaggcttttcatccagagagaaaacgta
tctcttcaggagcgacgtttggactacgagaccaatggtgtcatagcttgcagtggctgt
ggtcagacatggggttcaatgatgttttaccgtgggattgagctgccttgtctccatgtg
aaaaactttgtggtggatataaaaaagaaaaagtacagcaactgcaccaggtggaacgac
cttcctgtcaagtttcctgacttcgactacatcgaacacgccagcctgttggcacaaggc
tcggacgatgaagacacagagtggccctaa
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