Poecilia reticulata (guppy): 103468293
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Entry
103468293 CDS
T05149
Name
(RefSeq) thyroid hormone receptor alpha isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103468293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103468293
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pret03310
]
103468293
Transcription factors [BR:
pret03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
103468293
Nuclear receptors [BR:
pret03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
103468293
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
103468293
NCBI-ProteinID:
XP_008413477
UniProt:
A0A3P9P7H5
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Position
LG8:4632147..4706637
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AA seq
413 aa
AA seq
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MFDNQESNSSESDEKGWPDVPKRKRKNSQCSMKSMSALSISVPGYIPSYLEKDEPCVVCG
DKATGYHYRCITCEGCKGFFRRTIQKNLHPSYTCKYEGCCIIDKITRNQCQLCRFKKCIS
VGMAMDLVLDESKRVAKRRLIEENRERRKREEMVRTLQMRPEPDSAEWELIRMVTEAHRH
TNAQGSSWKQKRKFLADDIGHGQLMPTSDGDKVDLEVFSEFTKIMTPAITRVVDFAKKLP
MFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVKREHLKNGGLGVVSD
AIFDLGKSLAQFNLDDSEVALMQAVLLMSSDRSGLMSVEKIERCQEAYLLAFEHYINYRK
HNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEDQEV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaatcaggagagcaattcatcagagagcgatgagaaaggatggccagatgtg
ccgaagagaaagaggaaaaacagccagtgctccatgaagagcatgtctgctcttagcatc
tctgttccaggatacatccccagctatctggagaaggacgagccgtgcgtggtgtgtggg
gacaaggccaccggctaccactaccgctgcataacctgcgaaggctgcaagggtttcttc
cgcaggacaatccagaaaaatctccatccttcttacacctgtaaatatgaaggctgctgc
atcattgacaagatcacacgcaatcagtgccagctgtgtagattcaagaagtgcatctcg
gtgggcatggccatggacttggtgctggatgagagcaagcgcgtggccaagcggcgcctc
atcgaagagaaccgagagcggaggaagagggaagagatggtgcggacgctgcagatgagg
ccagagccagacagcgcagagtgggagctgatcagaatggtgactgaggcgcaccggcac
accaacgcccagggctcctcctggaaacagaagcgcaaatttctggcggacgacatcggc
cacggtcaactgatgcccacttcagacggagataaggtcgacctggaggtcttcagtgag
ttcaccaagatcatgacccctgccatcacccgcgttgttgactttgccaagaaactgccc
atgttttcagagctgccttgtgaagaccagatcatcctgctgaagggttgctgcatggag
atcatgtccctgcgcgccgccgtgcgctacgaccccgaaagcgaaacgttgacgctcagc
ggcgagatggccgtaaaacgtgagcacttgaaaaacggcgggcttggggttgtttcggac
gccatatttgatctgggcaaaagcctggcacagttcaacttggacgactccgaggtggca
ctgatgcaagcggtgctgctcatgagctcagatcggtcagggctgatgagcgtggagaag
atcgagcggtgccaggaggcctacctgctggcttttgagcactacatcaactaccgtaag
cacaacattccccacttctggccaaagctcttgatgaaggtcacggacctgcggatgatc
ggcgcctgccacgccagccgcttcctccacatgaaggtcgagtgtccaaacgaactcttc
ccgccactcttcctagaagtcttcgaggaccaggaagtgtga
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