Poecilia reticulata (guppy): 103470407
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Entry
103470407 CDS
T05149
Symbol
thbs4
Name
(RefSeq) thrombospondin-4 isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04145
Phagosome
pret04510
Focal adhesion
pret04512
ECM-receptor interaction
pret04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103470407 (thbs4)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103470407 (thbs4)
09144 Cellular community - eukaryotes
04510 Focal adhesion
103470407 (thbs4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103470407 (thbs4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103470407 (thbs4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pret04147
]
103470407 (thbs4)
00536 Glycosaminoglycan binding proteins [BR:
pret00536
]
103470407 (thbs4)
Membrane trafficking [BR:
pret04131
]
Endocytosis
Phagocytosis
Opsonins
103470407 (thbs4)
Exosome [BR:
pret04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103470407 (thbs4)
Exosomal proteins of colorectal cancer cells
103470407 (thbs4)
Exosomal proteins of bladder cancer cells
103470407 (thbs4)
Glycosaminoglycan binding proteins [BR:
pret00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103470407 (thbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
cEGF
EGF
Laminin_G_2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
103470407
NCBI-ProteinID:
XP_008417051
LinkDB
All DBs
Position
LG9:complement(23559088..23569893)
Genome browser
AA seq
975 aa
AA seq
DB search
MCFKAAALWLVLQQLLLTVAAQGIVYDLLVSPDCLPDLLQGSLKNKGRDEAFLLSSFRLQ
NRAPTSLFSVLNPKDNNKYLELNVQAKLSKMTLRYQKTDGRFGTTSFNHGSLADGREHHV
MMHASGLQRGPPRLNIYVDCRLAHTVNDLPAAFGSLPPGPNKVALRTLQSSGQDNLTDLK
LVIEDTIDNVATLQDCSMEPAESLHLLGFQGGRVVQDQTSMQELKSMLSEMRELLHKQIK
ETNFLRNTIAECLACGLEGSPTNTVPGQSPKQVVFPSHLTGCPPGTCFRQNMCISSESGG
FQCAPCPDGYTGDGVHCDDVDECSFNPCFPGVRCVNTAPGFRCEKCPVGYTGPEINGVGV
SYAKSHKQMCEDLDECLGPPENGGCTPNSLCYNTIGSFRCGECMAGFTGDQLTGCHGTRL
CPNGQPNPCDVNGECIVERDGSISCVCGIGWAGNGYECGKDTDIDAYPDNSLVCRDNNCN
QVLHSCVLLPYSRSTQACVRNYCLCVFQDNCVFVPNSGQEDADRDGSGDACDDDADDDGI
INVDDNCWLVPNLDQKNSDKDIHGDACDNCKTIQNPSQRDTDKDGLGDECDDDMDGDGLK
NVLDNCQHVPNPDQADRDNDGVGDACDSCPDVANPNQSDSDNDLVGDTCDDNIDSDGDGH
QNTKDNCPTVINSSQLDTDKDGMGDECDDDDDNDGIPDSEDNCRLVPNSDQKDSDMDKVG
DACEGDFDKDNVIDIIDHCPENAEVTLTDFRAYQTVVLDPEGDSQIDPNWVVLNQGMEIV
QTMNSDPGLAVGYKAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTY
WQAAPFRAVAEPGIQLKVVKSKTGPGEYMRNSLWHTGNTTDQVRLLWKDPRNVGWKDKVS
YRWFLQHRPQVGYIRARFYEGSKLVADTGVIIDTSMRGGRLGVFCFSQENIIWSNLKYRC
NDNIPDDYQEVERAE
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttcaaagcagcagctctatggctggtgctgcagcaactgctgctcactgtcgca
gctcagggtattgtctacgacctgctggtgtctccagactgcctgccagacttgctccaa
ggaagcctgaagaacaaaggcagggatgaggcgttcctcctctcgtccttcaggctccaa
aacagggcccccacctctctgttcagtgtgctcaaccccaaagacaacaacaagtacctg
gagctgaatgtgcaagccaaactgagcaaaatgacgcttcgttaccagaagactgacggc
aggtttggcaccaccagtttcaaccacggctccctggcagacggacgggagcaccacgtc
atgatgcacgccagcggcctccagcgcggcccgcctcgccttaacatctacgtcgactgc
aggctcgctcatactgtgaatgacctgccggccgcgttcgggtcactcccacctgggccc
aacaaggtggcactgaggaccctgcagtcaagcggacaggataatctgacagacttgaag
ctggtcattgaggacaccatcgacaacgtggccaccctgcaggactgcagcatggaacct
gcggagtctctgcacctgctgggtttccagggaggcagggtggtgcaagatcagaccagc
atgcaggagctgaagagcatgctgtctgagatgagggagctgctccacaagcagattaag
gaaacaaactttctgaggaacaccattgctgagtgtctggcttgtggactcgaaggcagt
cccaccaacactgtcccaggtcagagtcctaagcaggtggtgtttccttcccatctgact
gggtgccctccagggacctgtttcagacagaacatgtgcatttcctcagagtcagggggc
ttccagtgtgccccctgtcctgatggatacacaggagatggggttcactgtgacgacgta
gatgagtgcagctttaatccgtgtttccctggcgtccgctgtgtgaacaccgctcctggt
tttcgctgtgagaaatgccctgtgggatacactggaccagagatcaatggcgtcggagtg
tcttacgccaaatcacacaaacagatgtgtgaagacttagacgagtgtctgggcccgcct
gagaacggaggctgcacccccaactccctctgctacaacactataggctccttccgatgt
ggagagtgtatggctggtttcactggcgaccagttgacaggctgtcatggcaccagactg
tgccccaatggtcagccgaacccttgtgacgtcaatggggagtgcattgtggagagagat
ggaagcattagttgtgtgtgcggtattggttgggctggtaatggttacgaatgtgggaag
gacacagatattgatgcatatccagacaacagtcttgtgtgcagagacaacaactgtaac
caggtactccattcctgcgtccttctcccatactcacgttcaacccaggcttgcgtcaga
aactattgtttgtgtgttttccaggacaactgtgtgtttgtgcccaactctggccaagag
gatgcggacagggacgggtctggtgacgcctgtgacgacgatgcagacgatgacggcatc
attaacgtagatgataactgctggctggtcccaaatctggaccagaagaatagtgataaa
gacatccatggcgacgcctgcgataactgcaaaacaattcaaaatccctcacagagggac
acggacaaggacggcctgggagacgaatgtgacgacgacatggacggagacggcttgaaa
aatgttcttgacaactgccagcatgtcccgaacccagatcaggcagacagggacaacgac
ggcgtaggggacgcgtgtgacagctgtcctgacgtggccaaccctaatcagtcggactca
gacaatgacctagtaggagatacctgtgatgacaacatagacagtgacggtgacggtcac
cagaacacgaaagacaattgtcccactgtcatcaactcgtctcagctggacacggacaag
gatggaatgggagatgaatgtgacgacgatgacgataatgacggcataccagatagtgaa
gataattgcagactggttcccaactcagaccaaaaggactcagacatggacaaagttgga
gatgcgtgtgagggagattttgacaaggacaacgtgattgacatcatcgaccactgccct
gagaacgctgaggtcacgctgaccgacttcagagcctaccagaccgtggtgctggacccg
gagggagactcacagatagatcccaactgggtggtgctcaaccagggtatggagatagtc
cagaccatgaactctgatccaggccttgctgttggctataaagccttcagtggagttgac
ttcgagggaaccttccacgtgaacacagtgacggacgatgattatgctggcttcattttt
ggctaccaggactcgtcctccttctacgtggtgatgtggaaacagacggagcagacctat
tggcaggccgcgcccttcagagctgtcgctgagcctggaatacaattgaaggtggtgaag
tctaagacgggtcctggtgagtacatgaggaactccctgtggcacacaggaaacacaacg
gaccaggtgcgtctcctgtggaaggaccccaggaatgtcggctggaaggacaaggtttcc
taccgctggttcctccagcacaggccgcaggtcggatacatcagagctcgtttctatgag
gggtccaaactggtggcggacactggggtgatcattgacaccagtatgagaggtgggcga
ctgggtgtgttctgtttctctcaggaaaacatcatctggtccaacctgaagtaccgctgt
aacgacaacattcctgacgactatcaagaggtagaaagggcagagtga
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