Poecilia reticulata (guppy): 103471033
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Entry
103471033 CDS
T05149
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04120
Ubiquitin mediated proteolysis
pret04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103471033 (syvn1)
04120 Ubiquitin mediated proteolysis
103471033 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103471033 (syvn1)
Enzymes [BR:
pret01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103471033 (syvn1)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103471033 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
103471033
NCBI-ProteinID:
XP_008418028
LinkDB
All DBs
Position
LG10:complement(7737939..7748262)
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AA seq
635 aa
AA seq
DB search
MVRAILVTATSMALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHLRVLSLLGLLAVMDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYILHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQAQAPPPAPAPAPAAPANAP
AAPAPNVAPGMLPGFPPGVFPFWGPFPAVPPPAAAAPPAAPAAADAPAGSTDTTQAAGTS
QPTSAAADAATSSAAAAAPGSAIPGFPFSFPPPPFPAAPWLPMPPPPPFVSSMPPPPPSL
SRLTEEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLAPPRPEGGAA
EAGGADREAASTGAESPTTERDSSTSDPVGGATVSSQPADSTSSASDAERKENWDEGAAD
DEKGEPSAAELRRRRLRKLETTPSSPTSPSPPPDN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcaatcctggtgaccgccaccagcatggcgctgaccggcgccgtggtggcc
cacgcctacctgctcaaacatcagttctacccgaccgtcgtgtacctcaccaaaagcagc
cccagcatggcggttttgtacatccaggcgtttgtgctggtgttcttgctggggaagttc
atgagaaaggtgttctttggccagctgagggctgctgaaatggagcacctcatcgagcgc
tcctggtacgcggtgacggagacctgcctggcgttcaccgtgttcagggacgatttctcc
cctcgcttcgtcgccctcttcaccctcctgctcttcctcaagtgtttccactggctggct
gaggaccgggtggactttatggagaggagtccgaacatatcctgggtttttcacttgaga
gttttatctcttctaggacttctggctgtcatggacttcctgtttgttaaccatgcctgc
cacagcatcatcaccagaggagcttcggtccagctcgtttttggctttgagtacgccatc
ttgttgactatggtcctgacaacctttatcaagtacatcctccacactgtcgaccttcag
agtgaaaacccctgggacaacaaggccgtctacatgctctacactgagctcttcacaggt
ttcatcaaggttctcctctacatcgccttcatgactatcatgataaaggtccacaccttc
cccctgtttgccattcggcccatgtacctggccatgaggcagtttaaaaaagccgtaaca
gatgctataatgtcaaggagagcaatccgcaacatgaacactctatatcctgatgcaact
ccggaggatctgcaggcctcggacaacgtctgcatcatctgtagagaggaaatggtcact
ggagccaagaagctaccctgtaatcacattttccactccagctgcctgcgctcctggttc
cagaggcagcagacctgccccacctgccgcatggacgtcctcagggcatccaacaacaac
caggcccaggccccgcccccagctcccgccccagccccggcggcgcccgccaacgccccg
gcagccccggccccaaacgtggctcccggcatgctgccaggcttccctccaggagttttc
cctttctggggtcctttccccgcagttcctccacctgctgctgctgctccacctgcagct
cctgctgcagctgacgctccagcaggcagcacggacacgacgcaggccgctggcaccagc
cagcccacttctgctgctgcagacgctgctacgtcgtcagccgccgctgccgctccagga
tcagcaatcccaggattccctttctccttcccgcctcctcccttccccgctgcgccatgg
ctgccgatgcctccgcctcctcccttcgtgtcgtccatgcctcctccgcctccgtcgctc
tctcggctgacggaggaggaactgagggagctggaggccgaagggaggaggggcctggag
gccaggctgcagtgtctccagaacatccacaccctgctggacgccgccatgctcaacatc
caccactacctcagcaccgtcgccacgctcgcccctccgcggcctgagggtggcgccgca
gaagctggcggagccgatcgggaggcggcatccactggcgcagagagtcccaccacggag
agggactcgtccacctctgacccagtaggtggagccacagtctcctctcagcccgctgac
tccacctcctctgcctcagacgcagagaggaaggagaactgggacgaaggagcggcggac
gacgagaaaggagaacccagcgcagccgagctgaggcgccgccgtctccgtaagctagag
acgacgccttcgtcgccgacatcgccatcgccacctcccgataactga
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