Poecilia reticulata (guppy): 103473457
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Entry
103473457 CDS
T05149
Name
(RefSeq) thrombospondin-4-B-like isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04145
Phagosome
pret04510
Focal adhesion
pret04512
ECM-receptor interaction
pret04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103473457
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103473457
09144 Cellular community - eukaryotes
04510 Focal adhesion
103473457
09142 Cell motility
04820 Cytoskeleton in muscle cells
103473457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103473457
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pret04147
]
103473457
00536 Glycosaminoglycan binding proteins [BR:
pret00536
]
103473457
Membrane trafficking [BR:
pret04131
]
Endocytosis
Phagocytosis
Opsonins
103473457
Exosome [BR:
pret04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103473457
Exosomal proteins of colorectal cancer cells
103473457
Exosomal proteins of bladder cancer cells
103473457
Glycosaminoglycan binding proteins [BR:
pret00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103473457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
103473457
NCBI-ProteinID:
XP_008421953
LinkDB
All DBs
Position
LG12:complement(9264821..9282362)
Genome browser
AA seq
941 aa
AA seq
DB search
MILWTFILLLSQLLLNLCLHAEAQALAVYDLLTSPDCLPDLLQGGLAEQGVNEVFILTTF
KLQPKTGTTLFGLFNPRDNSKYFEFTVMGKLNRAVLRYLRTDKRMSSVSFNNLVLADGQQ
HRLLFHLKGLQQQGPGGVELHLDCRLVETVRDLPAAFQGLPAGYGMVELKTMQARDQESL
DELKLVVGDSFENVASLQDCHFQQRDSVQTLGVNTKQLSNQMLELTKVINELKDVLIQQV
KETSFLRNTISECQACGLGGTEVVKPRCAPGVCFRDDMCIETANGVECAPCPDGYTGDGF
NCDDVDECQFNPCFPGVKCVNTAPGFRCDACPLGYVGLPVEGVGILFAQTNKQVCDDIDE
CKGPDNGGCTANSICHNSVGSFYCGSCKTGFTGDQVRGCEPELSCGNSLTNPCNINAECI
RERDGSISCQCGIGWAGNGYLCGKDTDIDGYPDEKLKCKDANCRKDNCIFVPNSGQEDAD
RDGQGDACDDDADGDGIPNEQDNCRLKPNVDQRNSDADSHGDACDNCRVVNNPDQRDTDG
DGKGDACDDDMDGDGVRNFLDNCQRVQNRNQLDRDGDGVGDACDSCPDIPNPNQSDVDND
LVGDSCDTNQDSDGDGHQDTKDNCPLVINSSQLDTDKDGVGDECDDDDDNDGIPDTLPPG
PDNCRLVPNPDQIDDNNDGVGDICESDFDQDKVIDRIDNCPENAEVTLTDFRAYQTVVLD
PEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFI
FGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSRSGPGEHLRNSLWHTGDT
NDQVRLLWKDPRNVGWKDKVSYRWYLQHRPQIGYIRVRFYEGTQLVADSGVTIDTTMRGG
RLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSAQHTVDSI
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgattttgtggacattcatccttctgctctcgcagctgttattaaacctgtgcttacat
gcagaggcccaggctttggcagtctacgatctgctcacctcgcctgactgcttgccagac
ctgctgcagggaggtttggctgaacaaggggtgaacgaggttttcatcttaaccaccttc
aagctgcagcccaagactggaaccacactgtttggtttgttcaacccgagggacaacagc
aagtattttgagttcaccgtaatggggaagctcaaccgggctgtgctacgttacttgcgg
actgacaagagaatgagctccgttagcttcaacaaccttgtgctggcggacggccagcag
caccggctgttgttccacttgaagggtctgcagcagcagggtccaggcggggtggagcta
catctggactgcaggctggttgagacggtccgggatcttcctgccgccttccagggtttg
ccagcgggatacggcatggtggagctaaagacaatgcaagccagggatcaggagagctta
gatgagctgaaactggtagttggggactcgtttgagaacgttgcatcattgcaagactgt
cattttcagcaaagagattcggttcaaactttaggggtcaacacaaagcagctgtcaaat
caaatgctggagttaacaaaggtgataaacgagctgaaagacgttcttatccagcaggtc
aaggaaacatcttttctccgaaatactatttcagagtgtcaggcttgtggtctgggtgga
acagaggtggtgaaaccgagatgtgctcctggtgtctgtttccgcgatgatatgtgtatc
gagacagcgaatggtgtggagtgtgcgccctgtcctgacgggtacactggagatggcttc
aactgtgatgatgttgatgagtgccagtttaacccctgcttccccggagtgaagtgcgtt
aacaccgcccctggcttccgctgtgacgcctgtcctctgggttacgtcggcctgccggtg
gagggcgtgggcattttgtttgctcaaaccaacaaacaggtctgcgatgacattgatgaa
tgcaaaggacccgacaatggtggctgcactgcaaactcaatctgtcacaactctgtgggc
tccttttactgtggcagctgtaagactgggttcacaggagatcaggtgaggggctgtgag
ccagagctcagctgtggaaacagcctgaccaacccctgcaacatcaatgccgagtgcatt
cgagaaagagatggctctatttcttgtcagtgtggaattggctgggcgggcaacggatac
ctgtgcgggaaagacacggacattgatggatacccagatgaaaaactcaagtgcaaggac
gcaaactgtagaaaggataattgcatctttgttcccaactctggtcaagaggacgccgac
agggatggccagggagacgcctgtgatgacgatgcagatggtgacggtattcccaatgag
caggacaactgccggttgaagcccaacgtggatcagaggaacagcgatgcagacagccac
ggcgacgcctgtgacaactgtcgcgtggtgaacaaccccgaccagcgggacacggacgga
gacggcaaaggagatgcctgcgatgatgacatggacggagacggtgtgcgaaatttcctg
gacaactgccagcgtgtccagaacagaaaccagctggaccgggacggagacggcgtggga
gacgcttgtgacagctgccctgacatccccaacccaaaccagtctgacgttgataacgac
ctggttggagactcgtgcgacacaaaccaagacagtgatggcgatggtcaccaggatacc
aaggacaattgtccactggtgattaacagctcacagctggacaccgacaaagacggagtg
ggagacgaatgtgacgacgacgatgacaatgacgggatcccagatactctgccgccggga
ccggacaactgcaggctggtgcccaatcccgaccagatcgatgacaacaatgacggcgtt
ggagatatctgcgagtccgactttgaccaggacaaagtgattgaccggattgacaattgc
cctgagaacgcagaggtcaccctgacagacttcagggcctaccagacggtggtgctggac
cctgagggagacgcccagatcgaccccaactgggttgtcctcaaccagggaatggaaata
gttcagaccatgaacagtgacccgggacttgctgttggatacactgctttcagtggagtc
gacttcgagggcactttccacgtgaacacagttactgacgacgactacgccggcttcatc
tttggctaccaggactcgtcatccttctatgtggtgatgtggaagcagaccgagcagacc
tactggcaggcaacccctttcagagccgtggctgagccaggcatccagcttaaggctgta
aagtccaggtcaggccctggggaacacttgagaaactcgctgtggcacacgggagacacc
aacgaccaggtgcgtctgctatggaaggaccccaggaacgtcggctggaaggataaagtt
tcctaccgctggtatttgcagcaccgtccacagattggctacatcagagtacggttttac
gagggaactcagctggttgcagattctggcgtgaccatcgacacaacaatgagaggaggg
cgactcggcgtgttctgcttctcacaagaaaacatcatctggtccaatctgaaatatcgc
tgcaacgacaccatcccagaggatttccaggagttcagcgctcagcacaccgttgactca
atctaa
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