Poecilia reticulata (guppy): 103474708
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Entry
103474708 CDS
T05149
Symbol
dhx36
Name
(RefSeq) ATP-dependent RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103474708 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103474708 (dhx36)
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103474708 (dhx36)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
103474708 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
AAA_16
Motif
Other DBs
NCBI-GeneID:
103474708
NCBI-ProteinID:
XP_008424076
UniProt:
A0A3P9N3T6
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All DBs
Position
LG13:complement(19422809..19459834)
Genome browser
AA seq
1057 aa
AA seq
DB search
MSYGYGGGGGRRSRKGGREYRDGSRERLDRGGGGGGGGGGGGSDLDQDRGAGGGQRDRPP
PHLRGREIGLWYARYGAVRRKQADRRSRAVVHMDEAREEHITKLLNSVQSDPTRDSRGAQ
SSASDAWRTAASSSGHCYFDGDIPEEEKQKLEEEEQKKTSRTSQRGSSTAAKDEPPDNWD
EDDEDDVEKEKPMSEDKDLEFLFQEVVSDTSVDEDLKRDLQSKKTDRNYKEMLKFREKLP
SFGKKEDLVRLINSNRVLVVSGETGCGKTTQVTQFILDDHISRGRGSTCRVVCTQPRRIS
AISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGIILQWLRSDPLLSSV
SHLVLDEIHERNLQSDVLLVIVKELLNLRDDLKVILMSATLNAEKFSKYFDKCPMIHIPG
LAFPVEEFLLEDIIEMTRYRPQNQDRRPAWKRRFWQGHQSRSEKEEKEEEYKESWPCYAR
TLQGRYSDSTIEAVEMLDTDEKIDLELILALIRHIVLNEGEGAILVFLPGWDNISSLNDL
LMAQQMFRSERFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAETSITIDDVVYVI
DGGKIKETNFDTDNNISTMTAEWVSLANAKQRKGRAGRVQPGKCYHLYNGLRASLLEAYQ
LPEIMRTPLEELCLQIKILKLGSISRFLEKALDPPSEKAVNLAIKSLTDLNALDHAENLT
ALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKMADMRRRT
LSRNSKSDHLTIVYAFKGWQEAKQRGSRYEREYCWDNFLSANTLQMLHNMKGQFAEHLMS
AGFVSSRDPKDAKSNINSDNEKLIKAVIVAGLYPKVAMIRPSYSKKRPGVKVYTQTDGKV
CIHPKSVNAEEREFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDISIQKDEDQET
VAVDRWIVFRSPARIAHLVKSLKRELDSLLQDKISNPAPVDWDNRQSKDCAVITAIIDLI
TTQERPAGSSKDDGRTWASAPSGRHTYFDDDDDDDND
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggctacggcggtggaggtggaagaagaagcagaaaaggaggtagagagtac
agggatgggagcagagagagactggacagaggaggaggaggaggcggcggcggcggcggt
ggcggttccgacctcgaccaggaccgaggagcaggaggaggtcagagggaccgtcctcct
ccacacctgaggggccgggagatcggtttgtggtacgcgcgttatggagccgtgaggagg
aaacaagcggaccgtagatcgcgggccgtggtccatatggacgaggccagagaggaacac
atcaccaagctccttaactctgtccagagtgacccaacaagagacagcaggggcgcacag
tcctcagcgtctgacgcctggcggacagcagccagcagcagcggccactgttactttgat
ggggatatccctgaagaagagaagcagaagttggaggaagaggaacagaagaaaacaagc
cgcacatctcaacgtggctcctctacagcagctaaagatgaacctccagacaactgggat
gaagatgatgaggacgacgtggagaaagaaaaaccgatgagcgaagacaaggatctggag
ttcttatttcaggaagtagtcagtgacacatcagtggatgaggacttgaaaagagatttg
caaagcaaaaaaactgatcgaaattacaaagaaatgttgaaattcagggaaaaactacca
tcatttggaaagaaagaggatctggtgcggctcatcaactccaaccgcgtcttggtggtc
agcggggagacggggtgcggaaagaccactcaggtcacccagttcatcctggacgaccac
atcagcagagggcggggctcgacgtgccgcgtggtctgcacgcagccccgccgcatcagc
gccatctccgtagcagagcgtgtagctgcagagagagcagaaagtgtaggaaatggaaat
tcctgtggttaccaaatacgcctgcagagccggttaccacggagacaaggttcaatactg
tactgtacaacaggaattattcttcagtggctccgctctgatccgttgttatccagtgtc
agtcaccttgtgctggacgagatccacgagagaaaccttcagtcagacgttttgctcgtc
atcgtgaaggaattgctcaacctccgagatgatctcaaggtcatcctgatgagtgccacc
ctcaacgcagaaaagttctctaaatattttgataaatgtccaatgatccacatccctggg
ttggccttcccagtggaagagttcctactggaagacatcattgagatgaccagatatcgt
ccgcagaatcaggaccgtcggcctgcgtggaagagacgcttttggcagggccaccaatcc
agatcggagaaggaggagaaggaggaggagtataaggagagctggccatgttacgcacga
actctgcagggcagatactctgacagcacgatcgaggcggtggagatgttagacaccgat
gagaagattgatctggagctgatcctggcgctgatccggcacattgtgctcaacgagggg
gagggagcaatcttggttttcctgcccggctgggacaacattagcagtctgaatgacctc
ctcatggcgcagcagatgttccgatcagaaaggttcgtcatcatccctctgcactccctc
atgcccactgttaatcagacgcaggttttcaaaagacccccgccaggagttagaaagatt
gtgattgcaaccaatatcgcggagaccagcatcaccatagatgatgtcgtttatgtgata
gatggaggaaagattaaggagactaacttcgacaccgacaacaacatcagcaccatgacg
gccgagtgggttagcctggctaacgccaaacagagaaaaggacgtgctggcagggtgcaa
ccaggaaagtgctatcatctgtacaatgggcttagggccagcctgctggaagcctatcaa
ttacctgaaattatgaggacaccgctggaggagctctgcttgcagataaagattctgaag
ctcggctccattagtcgatttctggagaaggccttggacccgccgagcgagaaggcggtt
aacctcgccattaagagcctcacagacctgaacgctctggaccacgcagagaacctgacg
gcgctgggtttccacctggcgcggctccccgtggagccgcacatcggcaagctgatcctg
ttcggcgctctgctgggatgcctcgaccccgtgctcaccatcgccgcttcgctcagcttc
aaagaccctttcttcatacccctgggtaaagagaagatggcagacatgaggagaagaact
ctgtccagaaactcaaagagtgaccacctcactattgtttacgccttcaagggatggcag
gaagccaagcagcggggctccaggtatgagagggagtactgctgggacaacttcctgtct
gccaacacactccagatgctgcacaacatgaaaggtcagtttgccgagcatctcatgagt
gctggctttgtcagcagcagggatcccaaagacgctaaatccaatatcaactcggacaat
gagaagttgatcaaggcagtgattgttgctgggctgtaccctaaggtggccatgatccga
ccctcttacagcaaaaagagacctggggtcaaggtgtacacccagaccgacggaaaggtc
tgcatccatcccaaatctgtcaatgctgaagagagggaattcaactacacatggctcatt
taccacctgaagatgagaaccagcagcatcttcctgtacgactgcaccgaggtgtcgccg
ttctcgctgctgttcttcgggggagacatcagcatccagaaagacgaggaccaggagacc
gtcgcggtcgaccgctggatcgtcttcaggtccccggcgcgcatcgctcacctcgttaag
agtttgaagagagagctggattcgctgctgcaagacaaaatcagtaacccggctcctgtg
gattgggataaccgtcagtccaaagactgcgccgtcatcacggccatcatagacctcatc
actacccaggaaaggcccgcaggcagcagcaaggacgacggcaggacgtgggcgtctgct
cccagcggaaggcacacttacttcgatgatgacgacgacgacgacaatgattga
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integrated database retrieval system
