Poecilia reticulata (guppy): 103475262
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Entry
103475262 CDS
T05149
Symbol
tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pret03016
]
103475262 (tsen34)
Enzymes [BR:
pret01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
103475262 (tsen34)
Transfer RNA biogenesis [BR:
pret03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
103475262 (tsen34)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
SCAI
Motif
Other DBs
NCBI-GeneID:
103475262
NCBI-ProteinID:
XP_008424975
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All DBs
Position
LG13:complement(32903095..32906278)
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AA seq
292 aa
AA seq
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MEAELRPQEELSPAPVVGLSLCDSAPLLWRLQDLKAVRSDGLVGALLGSLPRTPRQNVRL
GRPLLLLPEEERLLGERRGAATLPARNQVSKRAGSEVLGNHWQRHAEEQQRSFEEQSVLA
LEDRKSALVRAMTSSSGSDPGSDEALQRRLLELEQNFSFPRSALAVQLSTARAGLSHCPE
ARAFLEADWPIRAQRCPRREARFQVFRDLRGRGFFLTSAGKFGGDFLVYPGDPLRFHAHF
IAVCLALDESICLLDVLCVARLGSNVKKTVLLCSPAPDGPVRYTSLQWSGMV
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagctgcggcctcaggaagaactgagccccgcccccgtcgtcgggctgagt
ctctgtgactccgcccccctcctgtggcggctccaggacctgaaggccgtgaggtccgac
ggcctggtgggggcgctgctcgggtcgctgcccagaaccccccggcaaaacgtccgactg
ggccggccgctgctgctgctgccggaggaggagaggctgctgggagaacggcgcggcgcc
gccactctgcccgcccggaaccaggtcagcaaacgggccgggtctgaggttctaggtaac
cactggcagcgtcatgcggaggagcagcagaggagcttcgaggagcagagcgttctcgct
ctggaggacaggaagtcggcgttggttcgagccatgacatcatcatcaggttctgatcca
ggctcagacgaggccctgcagcgccgcctgctggagctggagcagaacttcagcttcccg
cgctcggcgctggcggtgcagctgagcacggcgagggcggggcttagccactgtccggaa
gcccgcgccttcctggaggccgactggccaatcagagcgcagcgctgcccccgccgggag
gccaggttccaggtgttcagggacctgcgggggcggggcttcttcctgacgtctgcaggg
aagtttggcggagacttcctggtgtatccaggtgacccgctgcgtttccacgcccacttc
atcgccgtgtgcctggcgctggacgagtccatctgcctgctggacgtcctctgtgtggcc
cggctcggctccaatgtcaagaagacggttctgctgtgttcgccggcgccagacggccca
gtccgctacacctcgctgcagtggagcgggatggtgtga
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