Poecilia reticulata (guppy): 103475332
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Entry
103475332 CDS
T05149
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
103475332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103475332
Transcription factors [BR:
pret03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
103475332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
103475332
NCBI-ProteinID:
XP_008425102
UniProt:
A0A3P9N7T7
LinkDB
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Position
LG14:765390..768641
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AA seq
291 aa
AA seq
DB search
MPVSRMRMRPWLEKMIESNSISGLQWVDKEKTMFSIPWKHAARHGWELDKDACLFKEWAI
HTGKYTKGQNCDPKTWKANFRCAMNSLPDIEEVKDKSINKGHQAMRVFRMLPAVSKNKDK
RSKSRDTKSRKKRQAVKEEMESDYSDTQSPVNMCPPEETMSTQENTVDSTVNMEHGGFDC
TAEVPELSLLVEIETDPLQNHFSHRFEVSPEHNLEYDYQQDVIEICKILEKESQWMSNTD
SRGFLDNEARTSPGSNWSESSSELEDPPQYTTLDTNFQSNSYEFWNNFSLM
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtctagaatgagaatgaggccgtggctggagaagatgatcgagtcaaactcc
atcagcgggctgcaatgggtggataaggagaagacaatgttctctattccttggaagcac
gctgctcgacatggttgggagcttgacaaagacgcctgtctgttcaaagaatgggccatc
catacaggtaaatacacgaagggacagaattgcgatcccaaaacttggaaagccaacttc
cgatgtgccatgaactccctgcctgacattgaggaggtgaaagacaaaagcatcaacaaa
ggccaccaagccatgcgggtcttcagaatgctgcctgctgtctcaaaaaacaaagacaaa
aggagcaaatcgagggacaccaagtcgaggaagaagagrcaagcagttaaggaagagatg
gagtcagactacagcgacactcagtctcctgtaaacatgtgtccgcccgaggaaaccatg
tccactcaggaaaacacagtagacagcacagtgaacatggagcatggaggattcgactgc
acagctgaagttccagagttgtccctcttagtggagattgagacggatcctctgcagaac
cacttttcccacagatttgaggtttctccagaacacaaccttgaatacgactatcaacaa
gacgtcattgagatttgcaagatactggagaaagaatcacagtggatgagcaatacagac
agcaggggattccttgacaatgaagcacgcaccagtcctgggagtaattggagtgagtct
tcctcagagttagaagacccaccacagtacacaacactggacacaaacttccagagcaac
tcgtacgaattctggaacaacttttccttgatgtga
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