Poecilia reticulata (guppy): 103479973
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Entry
103479973 CDS
T05149
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103479973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103479973
Enzymes [BR:
pret01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103479973
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103479973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_6
zf-RING_5
zf-RING_2
U-box
Motif
Other DBs
NCBI-GeneID:
103479973
NCBI-ProteinID:
XP_008432913
LinkDB
All DBs
Position
LG17:complement(29241279..29243684)
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AA seq
686 aa
AA seq
DB search
MAQGIQLDREKFCCSLCTNLLRNPVTVPCGHIFCMICINKRLDNEARSGIYSCPQCKEFF
ISRPTLVKNSVIALVVEQLKKTEVQPEVPDLYREAEFIDVTCDFCSERKVKAVKSCLQCM
ASYCATHLQPHNEVPPLRKHKLVEPTASLEESICPVHQEVMKMFCKTDQRCICYLCSKDG
HKGHNKVSMEAERTERQKELQTVRQKIQLRIVEKKKDVKTFQQEEDAVSHAADRALTTTD
VVFTGLIETIEEKLSLMRDKMNSQQSIELGRFRKVRSKVEEEIMELKRKDIELDKLSRTE
DHANFLLKFPSLSRLSVPREQPTIRIRHQRNFDRVPATVSEAKKRLHKVLDEECEKILLA
ITGATALPNMSEPKSEEDTRKRRPDFYHTVEMSKPAVRQTTTQFMQAKLLQNLDSTTPSR
PSYLKPKLPDPSGSFRHPKQKSEDLSSSENFAEKMVTFEPKKNFFPERGYENPDVIPPNN
KPDVLPDRPLPLPVPVRGKGNVLRTRENFLEHACQITLNPDTAFPKLLLTKENRKVTFVS
EEQDYPNHPDRFIYTWQVLSQQSLSGRCYLEVERSGKGVMVAMAYKGISRAGTFSDCMFG
QNSTSWGLDCFQNSCEFRHNNNKTPIPGTWSSRVGVYLDHRAGILAFYSVFKTMTLLHRV
ETTFTEPLYVGLWLSDGATVEICKLE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagggattcaactggatcgagagaagttctgctgctctctctgcaccaatctg
ctcagaaatccagtgaccgtaccttgtggtcacatcttctgcatgatctgcatcaacaaa
cgcttggacaatgaagcacggtcaggcatctacagctgccctcaatgcaaagagttcttc
atatcaaggcccaccttggttaaaaacagcgtgatagcacttgtagtcgaacaattgaag
aagaccgaagtccaacctgaggttccagatctgtaccgtgaagctgaattcatagacgta
acttgtgatttttgctctgagaggaaggtgaaagctgtaaagtcctgcctgcaatgtatg
gcttcctactgcgccacacatctccagccgcacaacgaggtgcctcctttaaggaagcac
aagttggtggaaccaaccgcaagtctcgaggagagcatctgtcctgtgcatcaagaagtg
atgaagatgttctgcaagaccgatcagcgttgcatctgttatctctgctccaaggacggc
cacaaaggccacaacaaagtctcaatggaagctgaaaggacggagagacagaaggagctt
cagacggttcggcaaaagatccagctgaggatcgtagagaagaagaaagatgtgaagact
tttcagcaggaggaagatgcagtaagtcatgctgctgatagagcactgactactactgat
gtggtttttacaggactcattgagacaatagaggaaaaactctctcttatgagggacaag
atgaattctcaacagagcattgaactgggtcgcttcagaaaagttcggagtaaagtggag
gaggagattatggagttgaaaaggaaagatattgaactggacaaactgtctcgtacagaa
gaccatgctaattttttgttgaagtttccgtcattgtctcgtctgagtgttcctagagaa
cagccaaccatcaggatccgccaccagcgtaactttgatcgagttcctgccactgtttca
gaggccaaaaagagactgcacaaggttctcgatgaagaatgtgaaaagattctgcttgca
attactggtgctacggctttgcctaatatgtctgaaccaaaatctgaagaggacaccagg
aagcgcagacctgatttctatcacactgtagaaatgtccaaaccagcagttagacagacc
accactcagtttatgcaagccaaactcttgcagaaccttgatagtaccacaccttccaga
ccaagctatttaaaacccaagcttcctgaccccagtggtagcttcagacatcccaaacaa
aagtcagaagacttatccagcagtgaaaactttgctgagaaaatggttacgtttgaacca
aagaaaaacttcttccctgaaaggggatatgaaaatcctgatgttataccaccaaataat
aaacctgatgttttacctgacagacctctgcctcttcctgtccctgtaagaggcaaagga
aatgttttaagaactagagaaaacttcctggaacatgcctgccaaatcacactgaatcca
gacaccgcattcccaaaactgttgctaactaaggagaacagaaaagtaacatttgtaagc
gaagaacaagattatcccaaccacccagacaggtttatttacacctggcaggtcctgagt
caacagagccttagtggccgctgctacctggaagtggagaggagcgggaagggagtcatg
gtggcgatggcttacaaaggcatcagtagagcagggaccttcagcgactgcatgtttgga
caaaacagcacctcttggggtcttgattgttttcagaacagctgcgagttcagacacaac
aacaacaagactcccatcccaggcacatggtcctccagagtgggagtgtacctggatcac
agagcaggtattctggctttctacagcgtctttaaaaccatgacgctcctgcacagagtc
gagaccacattcaccgagccgctctacgttggactctggctctcagatggagcaactgtg
gagatctgcaaactagagtag
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