Providencia rettgeri: RB151_015880
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Entry
RB151_015880 CDS
T04571
Symbol
recD2_2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
prg
Providencia rettgeri
Pathway
prg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RB151_015880 (recD2_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prg03400
]
RB151_015880 (recD2_2)
Enzymes [BR:
prg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RB151_015880 (recD2_2)
DNA repair and recombination proteins [BR:
prg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RB151_015880 (recD2_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
Viral_helicase1
UvrD_C_2
AAA_11
SH3_13
PhoH
UvrD-helicase
PIF1
AAA_22
nSTAND3
AAA_16
AAA_14
AAA_28
HerA_C
AAA
SLFN-g3_helicase
ATP_bind_1
T2SSE
NTPase_1
NACHT
RsgA_GTPase
Herpes_Helicase
AAA_23
AAA_29
cobW
Motif
Other DBs
NCBI-ProteinID:
APC11268
LinkDB
All DBs
Position
complement(1781260..1783434)
Genome browser
AA seq
724 aa
AA seq
DB search
MHEEYFRVTSCQHNGYKYTIFTGVPLKTDSYKINSGKYIVSIRCENQSLPIKPSVGQQWR
VRGVRTLETVQAGDYKLQQHLYDAPAEMECTLPETGEALIRFIANEKEFTGIGEAKARAL
WNVFGSDLHPMLQSNTSEHRGRLREVLSEVSVTALYNGYAKYKNLAHANWLASLGVPLSI
QQRILKYHDNRTVEVLKTNPYALLGFGMPFPDIDAIAEKMGMDKSAPVRLAAALESAIRK
EVEKGHTYASHPALRPEVTKLLGDKALVAEAFASGYRNGQFILRPETGTYHPTAQIMMES
VVAKRLKALAAIKNEDESVFKALTEAVQELPYDLTEQQVQAVELSLTNAVSCITGGAGTG
KTTVLRAVLKAYAALGYQVHAVALSGRAAMRLHESIGFFTMTIARLLREEPISPSLDQAQ
HLLVIDEASMTDLPTMYRIVTHLDPSVRIILTGDPNQLPAIGCGKVLSDIVESGAIATVE
LNIVKRQEDSTGIPEYSATINRGEVPPALSVGAITFHETPPQKMVDKCKSLYAESPYNTQ
IIGATKALVGEVNRECQKLINPDGECLQFRLHGDEFFLDIRVGDPILFTRNKYNIGIQNG
SLGVLSSTERDTKDGQETFGVVTLDTGEAISITDEVFDCMELGYGITLHKAQGSQFPRII
VAVQTGRISDRAWLYTAITRAEAEIHIVGQASDFASIVKSVSNATRRASFLRELLQERDS
GVSH
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagagtatttccgtgtcaccagctgccagcataacggctataaatacacgatc
ttcacgggcgttcccctcaagactgacagttacaagatcaactcgggcaaatacatcgtc
agcatccgatgcgaaaaccagtccctgcctatcaagccgtccgttggtcagcaatggcga
gtgcgtggcgtaaggacgctggagaccgttcaggcaggcgattataagcttcagcaacat
ttgtatgacgccccagctgagatggagtgcacgctgccggaaacgggcgaggcgctgatc
cgtttcattgccaatgaaaaggagttcaccggtatcggtgaggccaaagcacgcgccctc
tggaacgtttttggcagtgacctgcaccccatgctccaatccaatacctccgagcacaga
ggccgtctcagggaggttcttagcgaggtttcagtaaccgcgctatacaacggctacgcc
aagtacaaaaaccttgcgcatgcgaattggctggcttctctgggagtgccgctgagcatc
cagcaacgcattctaaagtaccacgataatcgaaccgttgaggtactcaagaccaatccc
tacgcattgctcggattcggaatgccttttcccgatatcgatgcgattgctgaaaaaatg
ggcatggataaatcggcaccggtgcggctcgcagctgcgttagaaagcgcgatacgaaaa
gaggtagaaaaggggcacacctacgcctcccatccggcgctcaggcccgaggtgaccaag
cttctgggcgataaagctctggtcgcagaggcgttcgccagcggttatcgcaacggccag
ttcattctcaggccagagaccggcacctaccaccctaccgcccaaatcatgatggagtcg
gtcgttgcgaagcggctcaaggccctggccgccatcaagaatgaagatgaatccgtcttc
aaggcgctcaccgaggccgttcaggagttgccctacgacctgaccgagcagcaggtccaa
gcggtcgagttgagccttaccaatgcggtgtcctgcattacgggtggtgccggtacgggt
aaaaccacggtccttcgtgccgtgctcaaagcctatgccgcactaggctatcaggttcat
gccgtcgctctgtcggggcgagctgctatgcgactgcacgagagcatcggattcttcacc
atgacaattgctcgcctgttgcgggaagagccgatctcgccgtcactggatcaggcgcag
catctcctggtcatcgacgaagccagtatgaccgacctgccgaccatgtatcggattgtt
acgcacctcgatccttcggtacgcatcatcctgaccggcgatccgaaccagctaccagcc
atcggctgcggcaaagtcctctcagacatcgttgagtccggtgcaatcgctacggttgag
ttgaacatcgtcaaacgccaggaagactcaacgggcatcccggaatactcggccaccatc
aatcggggtgaggtgcctcctgcgttatcggttggcgcaatcacgttccacgagacgcct
ccgcagaagatggtcgataagtgcaaatccttgtatgcggagtcaccctataacactcag
atcatcggagccaccaaggctctagttggcgaggtgaaccgtgagtgccaaaagctgatc
aatcccgatggggagtgcttgcagtttagactgcatggcgatgaattcttcctcgatatc
agagtgggcgacccgatcctcttcaccaggaacaagtacaacatcggcattcagaatggg
tctcttggcgtattatcctcaacagagcgcgacaccaaggacggccaggaaacatttggt
gtcgtgacgctggataccggcgaagccatttcaattacggatgaagtcttcgattgcatg
gagcttggctacggaatcacgctccacaaggctcaagggagccagttcccgagaatcatc
gtggcagtccagacggggcgtatctcagaccgtgcgtggctttacacggcgattacccgt
gccgaggcagagatacatattgtcgggcaggctagtgattttgcgtccatcgtaaaatcg
gtaagcaatgccaccaggcgggcgagtttcttgagggagctgctgcaagagagggattcg
ggggtaagccattaa
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