Pseudomonas rhizosphaerae: LT40_05300
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Entry
LT40_05300 CDS
T03339
Name
(GenBank) ATP-dependent DNA ligase
Organism
prh
Pseudomonas rhizosphaerae
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
AIS16859
UniProt:
A0A089YMS1
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Position
complement(1154915..1156624)
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AA seq
569 aa
AA seq
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MKAFAQLYANLDETTSTNAKRQFLEDYFRQAQPADAAWAVYFLSGGRPRQLVPTKVLREL
AVKLANVPEWLFEESYQAVGDLAETFSLLLPEAEQTSDEGLAWWLENALLPLRGLPPEEL
HERLPPLWAQLDRASLMLCLKLITGSFRVGVSKLLVTRALAQMAGLDSKRVAQRLVGYTD
LSHRPVADSYLKLIAEESTDEHAQRGGQPYPFFLAHSLQQPVDQFDTLLGPSSDWQVEWK
WDGIRAQLVKRDGRLWIWSRGEELVSDRFPELHALTASLPDGTVIDGEIVVWKTPPPTDV
APEDFSLDDASSPSEDAPAVQPFALLQQRIGRKTLSKKILEEIPVVVLAYDLLEWQGEDW
RSRPQHERRTQMEQVIAQAADPVLRPSPVLTGEDWLDLSRQREASRALGVEGMMLKARDS
LYGVGRTKDMGTWWKWKVDPFSVDAVLIYAQAGHGRRASLYSDYTFAVWDGPPGASERTL
VPFAKAYSGLTDEEMRKVDAIVRKTTVEKFGPVRSVTPTLVFELGFEGIALSKRHKSGIA
VRFPRMLRWRHDKPVAEADSLATLQDLLA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagcgtttgcgcagttgtatgccaatctggacgaaaccacttcgaccaatgccaag
cgtcagtttctggaagactacttccgtcaggcacagccagccgacgcggcctgggcggtg
tacttcctgtccggtggccgcccgcgccaactggtgccgaccaaggtgttgcgcgagctg
gcggtgaagctggcgaacgtgcccgaatggttgttcgaagaaagctatcaggccgtgggc
gatctggcggagacgttctcgctgttgctgcccgaagccgaacagaccagcgacgaaggc
ctggcctggtggctggaaaacgccctgttgcccttgcgcggcctgccacccgaagagctg
cacgagcgcctgccaccgttgtgggcccagttggatcgggccagcctgatgctttgtctg
aaattgattacaggcagcttccgcgttggcgtttcgaaactgctggtgacccgagcgctg
gcgcagatggccggtctggacagcaagcgtgtagcgcagcgcctggtgggctataccgac
ctgtcgcaccgccctgtcgcggacagctacctcaagctgatcgctgaggaatccacggac
gagcacgcgcagcgtggtggccagccctacccgttcttcctcgcccactcgctgcaacag
ccggtcgatcagttcgacacgttgctgggccccagcagtgactggcaggtggaatggaaa
tgggatggcatccgcgcccaattggtgaagcgtgacggacgcctgtggatctggtcgcga
ggcgaggagctggtgtcggaccggtttccggaactgcacgctttgacggcaagcctgccc
gacggcacggtcatcgatggcgagatcgtggtctggaagacaccgccaccgacggatgtg
gcgcccgaggatttcagcttggacgacgcatcgagcccctcggaggatgcaccggccgtt
caaccgtttgccctgctgcaacagcgaatcggccgcaagactttgagcaagaagatcctc
gaagagattcccgtggtggtactcgcctatgacctgctcgaatggcagggtgaagactgg
cgcagtcgtccgcaacacgaacgtcgcacacagatggaacaggtcatcgcgcaagcggcc
gatccggtactgcgtccatcgccggtattgaccggcgaagactggctggatctgagccga
cagcgtgaggcatcacgggcgctgggtgtggaaggcatgatgctcaaggcgcgcgattca
ctgtatggcgtgggccggaccaaggacatgggcacctggtggaagtggaaggtggacccc
ttcagcgtcgacgcggttttgatctatgcccaggccggccatgggcgccgggccagtctg
tacagcgactacacgtttgccgtgtgggacgggccacccggagcatcggagcggaccctg
gtgcccttcgccaaggcctattcggggttgaccgacgaagagatgcgcaaggtcgatgcc
atcgtgcgcaagaccactgtggagaaattcggcccggtgcgcagcgtgacgcccacgctg
gtcttcgaactcgggttcgaaggcattgcgctgtccaagcgccacaagagcggcattgcc
gtgcgctttccgcgcatgctgcgctggcggcacgacaaaccagtggccgaagccgacagc
ctggcgaccttgcaggacctgctggcctga
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