Prosthecochloris sp. CIB 2401: Ptc2401_00306
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Entry
Ptc2401_00306 CDS
T04424
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
proc
Prosthecochloris sp. CIB 2401
Pathway
proc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
proc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ptc2401_00306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
proc03400
]
Ptc2401_00306
Enzymes [BR:
proc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Ptc2401_00306
DNA repair and recombination proteins [BR:
proc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Ptc2401_00306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ANT64107
UniProt:
A0A1B1PZT6
LinkDB
All DBs
Position
complement(319709..320308)
Genome browser
AA seq
199 aa
AA seq
DB search
MPDTTPAITKAEKLNTLYLQSKDCLQCSLGSTRTNFVFGEGNPEAKIVIIGEAPGAEEDR
LGRPFVGRSGQLLDKILAAIGFSRDDVFICNIVKCRPPGNRNPQKDEIRSCLPWLEMQLK
AIEPKVLLLLGRVAANTLFENNASMGSMRGRILTWKGYDVVVTYHPAALLRNPNWKYPCW
DDVRMLKAQYEKLMKEEQG
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgccagatactacccccgcaataaccaaggctgaaaagctcaataccctctacctgcag
tcgaaggattgtctgcaatgttcacttggttcgacgcggactaatttcgtgttcggggag
ggtaaccccgaggcaaaaatcgttattattggagaggcgcctggtgcggaggaagacagg
ctcggcagaccgtttgtaggcaggtcggggcagcttctggacaagattctcgccgctatc
gggttttcgagggacgacgtgttcatctgcaacatcgtcaagtgcaggccccctggcaac
cgcaacccacagaaggatgaaatcaggagctgcctgccgtggctggaaatgcagctgaag
gcaatcgaaccgaaagtgctgctgcttctcgggcgtgttgcagccaatacgctgttcgag
aacaacgcgtcgatgggttcgatgcgaggcagaatacttacatggaaaggctacgatgtg
gtcgtcacctatcacccggcagcgcttctgcgtaacccgaactggaagtatccatgctgg
gacgatgtccggatgctcaaggcacagtatgagaagctcatgaaggaggagcagggataa
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