Pseudoalteromonas rubra: AT705_08390
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Entry
AT705_08390 CDS
T04179
Name
(GenBank) transcriptional regulator
Organism
prr
Pseudoalteromonas rubra
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_2
Mg_chelatase
AAA_16
P-loop_TraG
AAA_19
HTH_29
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ALU42960
UniProt:
A0A0U3I5J9
LinkDB
All DBs
Position
1:1903490..1904989
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AA seq
499 aa
AA seq
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MDPVTNITLLFVDDEPLILRSLTRALKSEPYTVFTATSGEEGLALLEQHPIDVVVSDKMM
PNMSGIEFLAQVAERFPDTIRMMLTAFTEVEDLIDAINQGKVWGYMQKPFDISNIKLTLE
QAVQTKMLVAERNMLRASLQRYHSSIKSQFYRFVGGSIAMQMVYKAIEKAGPSQANVFIT
GPSGTGKELAADAIHRASTRKDKPLVCINCAAIPNELMESEIFGHIKGAFSGAVTNRDGA
ATQADGGTLFLDEIGEMDMNLQAKILRFVQSGAFQKVGSGKEEKVDVRFICATNREPHQA
IADQRLREDLFYRLNVIAIDLPALHERDHDALQIAQHFLSKFSEIENKVFVGFSSAAERL
IVNYDWPGNVRQLENLIHSCVVMSDGPLITEDTLQMQLKLKPSDAQVLLNGQSGSAAAAQ
DTPMPQPVAVQESGYAAPLPPEVPSENQICSLAEVERIAIEKAIAACDDNVVKAASLLEV
SPSTLYRKIQQWGDNKTGA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggacccggttactaacattaccttactgttcgtcgatgacgaaccccttattctgcgc
tccctcacccgtgcgcttaaaagcgagccttatacggtgttcaccgcgacaagtggagaa
gaaggcctggccttgttagaacagcaccctatcgacgttgttgtctcagataaaatgatg
cccaatatgtccggcattgaatttctggctcaggtcgccgagcgttttccggacaccatt
cgtatgatgctcaccgccttcaccgaagtagaagatctcattgacgcaattaaccaaggt
aaggtatggggctatatgcaaaagcccttcgacatcagtaatatcaagctgacacttgag
caagccgttcagactaagatgttggtcgccgaacgcaatatgttgcgggccagcctacag
cgctatcatagctcaatcaaatcgcagttttatcgctttgtagggggctccattgccatg
caaatggtgtataaagccatcgaaaaagcaggccccagtcaggctaatgtatttatcacc
gggcccagtgggaccggtaaagagctggctgccgatgctattcaccgcgccagcacacgt
aaagacaaaccgctggtgtgcatcaactgtgctgcgatccccaatgaactgatggaatca
gagatctttggtcacatcaaaggcgcattctcgggggcagtcactaaccgcgatggtgct
gccacgcaagcagatggcggcaccctgtttttagatgaaatcggcgaaatggacatgaac
ctgcaggctaagatcttacgctttgtccagtcaggggccttccagaaggtcggtagtggc
aaagaagaaaaggtcgatgtgcgttttatctgcgcgaccaaccgcgaaccacatcaggcc
attgccgatcagcggttacgtgaagacttgttttaccgtctgaacgtcattgccattgat
ttgcccgcattgcatgaacgagatcacgatgccctgcaaattgcgcagcactttttgagc
aagttcagtgaaatcgaaaacaaagtctttgttggtttttcatctgccgcagagcgactc
atcgtaaactatgactggcccggtaatgtacgtcagctcgaaaacctgatccacagctgt
gtggtaatgtccgatggtcccctcatcaccgaagacacgttacaaatgcagcttaagctc
aagccgagcgatgcccaggttttacttaacggtcagtctggcagcgccgctgcagctcag
gacacaccaatgccgcaacccgtggcagtgcaggaaagtggctatgcagccccccttcca
ccggaagttccttctgaaaatcagatttgttcactcgccgaggttgaacgtatcgccata
gaaaaggccattgcagcatgcgatgacaatgtggtgaaagctgccagtttactcgaagtt
agcccttcaacgctgtatcgcaaaatacagcaatggggagacaataaaaccggtgcctga
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