Pseudoalteromonas rubra: AT705_12175
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Entry
AT705_12175 CDS
T04179
Name
(GenBank) DNA replication protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
prr
Pseudoalteromonas rubra
Pathway
prr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AT705_12175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prr03400
]
AT705_12175
DNA repair and recombination proteins [BR:
prr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AT705_12175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
DUF2813
AAA_29
ABC_tran
AAA_13
AAA_27
AAA
NACHT
AAA_16
ATPase_2
nSTAND3
RsgA_GTPase
EST1
Motif
Other DBs
NCBI-ProteinID:
ALU43642
UniProt:
A0A0U3GFK6
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All DBs
Position
1:2803667..2804755
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AA seq
362 aa
AA seq
DB search
MSLNQISLNNFRNIEALSFSPSEQINIILGENGSGKTSLLEAIYFLSNGRSFRTNKHKLM
IRHEQDKCIVHGKKQLHSLSIPIGISKNLQGETQLRIQGQASRKIAELAQILPTQVITPE
SYELFFGGPKERRKFLDLGVFHVEHQFYSVWKDFNKVLKQRNALLKTKPAQYQLQIRTWD
REFVRLAEQINMFRKAYISRFERHFFDKIGVISPIFKGLEMRYDAGWKGELAEVLNAQLE
RDSKLGYTTKGPHKADFNFYANGHGVENILSRGQLKLTLYALKIAQNNLIEAETEKQSIL
LIDDLPSELSQETMLSIAHLLAECQSQLFITAIDSESIQAIVEPMKRNVEMFHVEHGRLI
TK
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaaatcaaattagccttaataattttcgcaatattgaggccctttctttttca
ccaagcgaacaaatcaatatcattttaggcgagaacggcagtggaaaaaccagtctgcta
gaagccatttacttcctttccaatgggcgttcatttagaacgaacaagcataaattgatg
atccgtcatgagcaggataagtgtattgttcatggtaaaaagcaactgcatagtttgtct
atccccataggtataagcaaaaatttgcagggcgaaacacagctcaggatccaggggcaa
gcgagtcggaaaatcgctgaattggcgcagatcctgccaactcaggtgatcacaccagag
agctacgagctgttttttgggggaccaaaagagcgtcgaaaatttctcgacttaggcgtg
ttccacgtggaacatcagttttatagcgtctggaaagacttcaacaaagtgcttaaacaa
cgaaatgctttgctgaaaactaagcctgctcagtaccagcttcagatacgtacttgggac
cgagaatttgttcgtttggctgagcaaataaatatgttcagaaaggcgtatataagtagg
tttgagcgccatttttttgataagataggggtgataagccccatctttaaaggccttgaa
atgcgctatgacgcaggctggaaaggggaactggctgaggtgctaaacgcccaactggag
cgggatagcaagcttggctatacaactaaagggccacataaagccgattttaacttttat
gctaatggtcacggcgttgaaaatatactgtctcggggtcagttaaagttaaccctctat
gcgctaaaaatcgcacagaataacttaattgaggccgagaccgagaagcaatccatattg
ctgatcgacgatttaccttcggagttaagccaggagacgatgctgagcatcgcgcattta
cttgcagaatgtcagtcgcagctatttatcactgcgatagactccgaaagtatccaggcc
attgtggaacccatgaaacgaaatgttgagatgttccacgtggaacatggccgcttaata
acaaaataa
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